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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170063760
CDZK01024033
180100
Actinomycetota
GTA
Tyr
>WENV170064447
CDZK01045889
274917
Actinomycetota
TAC
Val
>WENV170063085
CDZK01004863
451381
Actinomycetota
CGT
Thr
>WENV170064608
CDZK01049920
451359
Actinomycetota
TTT
Lys
>WENV170063011
CDZK01002074
30276
Actinomycetota
GCT
Ser
>WENV170064327
CDZK01041226
30281
Actinomycetota
GAG
Leu
>WENV170064215
CDZK01037658
270486
Actinomycetota
CGG
Pro
>WENV170063466
CDZK01016266
270467
Actinomycetota
TGG
Pro
>WENV170063823
CDZK01025951
86856
Actinomycetota
TGA
Ser
>WENV170063460
CDZK01015889
86856
Actinomycetota
TGA
Ser
>WENV170063378
CDZK01014279
228568
Actinomycetota
TAA
Leu
>WENV170063547
CDZK01018278
451655
Actinomycetota
CCA
Trp
>WENV170064265
CDZK01039094
451655
Actinomycetota
CCA
Trp
>WENV170063086
CDZK01004863
217997
Actinomycetota
TAG
Leu
>WENV170064587
CDZK01049175
653368
Actinomycetota
CTG
Gln
>WENV170063070
CDZK01004158
270704
Actinomycetota
ACG
Arg
>WENV170063055
CDZK01003400
451413
Actinomycetota
CCT
Arg
>WENV170064439
CDZK01045523
270415
Actinomycetota
TAT
Ile
>WENV170063744
CDZK01023861
270417
Actinomycetota
CAA
Leu
>WENV170063985
CDZK01030581
270403
Actinomycetota
TGT
Thr
>WENV170064367
CDZK01043375
451410
Actinomycetota
CGT
Thr
>WENV170064314
CDZK01040477
72674
Actinomycetota
CGA
Ser
>WENV170063508
CDZK01017153
653819
Actinomycetota
TTC
Glu
>WENV170063236
CDZK01009029
653353
Actinomycetota
GAC
Val
>WENV170064563
CDZK01048270
153767
Actinomycetota
CAG
Leu
>WENV170064180
CDZK01036305
277197
Actinomycetota
CAT
Met
>WENV170064006
CDZK01031591
779392
Actinomycetota
CCC
Gly
>WENV170064524
CDZK01047139
451443
Actinomycetota
TGC
Ala
>WENV170064586
CDZK01049175
451402
Actinomycetota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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