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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170063435
CDZK01015875
451336
Bacillota
GAA
Phe
>WENV170063087
CDZK01004866
458652
Bacillota
GCC
Gly
>WENV170063309
CDZK01011424
458652
Bacillota
GCC
Gly
>WENV170063465
CDZK01016242
275710
Bacillota
CCG
Arg
>WENV170063080
CDZK01004828
270416
Bacillota
CAC
Val
>WENV170063332
CDZK01012046
270416
Bacillota
CAC
Val
>WENV170064580
CDZK01048925
270416
Bacillota
CAC
Val
>WENV170063874
CDZK01027288
86860
Bacillota
TGA
Ser
>WENV170064588
CDZK01049309
779387
Bacillota
TTG
Gln
>WENV170064352
CDZK01042562
779387
Bacillota
TTG
Gln
>WENV170062972
CDZK01001192
779387
Bacillota
TTG
Gln
>WENV170064546
CDZK01047946
465106
Bacillota
TGT
Thr
>WENV170064401
CDZK01044668
465106
Bacillota
TGT
Thr
>WENV170063941
CDZK01029528
285831
Bacillota
GTC
Asp
>WENV170064062
CDZK01033096
466790
Bacillota
CGG
Pro
>WENV170063143
CDZK01006908
466790
Bacillota
CGG
Pro
>WENV170063713
CDZK01022108
451373
Bacillota
TTT
Lys
>WENV170064363
CDZK01043098
270426
Bacillota
GAT
Ile
>WENV170064360
CDZK01043067
270426
Bacillota
GAT
Ile
>WENV170063381
CDZK01014576
270426
Bacillota
GAT
Ile
>WENV170063176
CDZK01007375
270426
Bacillota
GAT
Ile
>WENV170064083
CDZK01033807
451367
Bacillota
TAC
Val
>WENV170063826
CDZK01025956
451367
Bacillota
TAC
Val
>WENV170063339
CDZK01012347
451367
Bacillota
TAC
Val
>WENV170063310
CDZK01011424
451367
Bacillota
TAC
Val
>WENV170064263
CDZK01038856
653367
Bacillota
CTC
Glu
>WENV170064155
CDZK01035439
653367
Bacillota
CTC
Glu
>WENV170063723
CDZK01022716
653367
Bacillota
CTC
Glu
>WENV170063663
CDZK01021386
653367
Bacillota
CTC
Glu
>WENV170064535
CDZK01047542
468336
Bacillota
GCC
Gly
>WENV170064145
CDZK01035410
468336
Bacillota
GCC
Gly
>WENV170063943
CDZK01029528
468336
Bacillota
GCC
Gly
>WENV170064362
CDZK01043098
467963
Bacillota
TGC
Ala
>WENV170063175
CDZK01007375
467963
Bacillota
TGC
Ala
>WENV170063887
CDZK01027690
112239
Bacillota
CAG
Leu
>WENV170063079
CDZK01004786
112239
Bacillota
CAG
Leu
>WENV170064271
CDZK01039233
88702
Bacillota
CAG
Leu
>WENV170063254
CDZK01009715
88702
Bacillota
CAG
Leu
>WENV170063253
CDZK01009715
88702
Bacillota
CAG
Leu
>WENV170062968
CDZK01000893
465093
Bacillota
GCC
Gly
>WENV170063961
CDZK01029856
465093
Bacillota
GCC
Gly
>WENV170063308
CDZK01011279
86865
Bacillota
AAG
Leu
>WENV170063796
CDZK01025217
779389
Bacillota
TCC
Gly
>WENV170063068
CDZK01004048
779389
Bacillota
TCC
Gly
>WENV170063302
CDZK01011046
466782
Bacillota
CCC
Gly
>WENV170063137
CDZK01006346
466782
Bacillota
CCC
Gly
>WENV170064326
CDZK01041145
179909
Bacillota
GTA
Tyr
>WENV170064061
CDZK01033096
779385
Bacillota
CTG
Gln
>WENV170063921
CDZK01028798
779385
Bacillota
CTG
Gln
>WENV170063875
CDZK01027337
779385
Bacillota
CTG
Gln
>WENV170063462
CDZK01016027
779385
Bacillota
CTG
Gln
>WENV170063142
CDZK01006908
779385
Bacillota
CTG
Gln
>WENV170064127
CDZK01034980
467075
Bacillota
TGC
Ala
>WENV170064585
CDZK01049166
451375
Bacillota
GGC
Ala
>WENV170063801
CDZK01025217
451375
Bacillota
GGC
Ala
>WENV170063229
CDZK01008998
451375
Bacillota
GGC
Ala
>WENV170063242
CDZK01009350
270447
Bacillota
GTT
Asn
>WENV170062953
CDZK01000214
653369
Bacillota
CTC
Glu
>WENV170063520
CDZK01017543
451334
Bacillota
TGT
Thr
>WENV170064500
CDZK01046749
451334
Bacillota
TGT
Thr
>WENV170063109
CDZK01005427
653347
Bacillota
TGT
Thr
>WENV170064073
CDZK01033566
270405
Bacillota
ACG
Arg
>WENV170063103
CDZK01005201
270405
Bacillota
ACG
Arg
>WENV170063061
CDZK01003951
270405
Bacillota
ACG
Arg
>WENV170064168
CDZK01035788
780500
Bacillota
CCA
Trp
>WENV170063930
CDZK01029171
454988
Bacillota
TGC
Ala
>WENV170064430
CDZK01045434
284784
Bacillota
GAT
Ile
>WENV170063658
CDZK01021250
285826
Bacillota
CAT
Met
>WENV170063612
CDZK01019606
285826
Bacillota
CAT
Met
>WENV170064216
CDZK01037683
451372
Bacillota
GAA
Phe
>WENV170063712
CDZK01022108
451372
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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