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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170064839
CDZL01006554
451336
Bacillota
GAA
Phe
>WENV170065226
CDZL01018204
451336
Bacillota
GAA
Phe
>WENV170064616
CDZL01000707
275710
Bacillota
CCG
Arg
>WENV170064842
CDZL01006562
270416
Bacillota
CAC
Val
>WENV170064692
CDZL01002499
182231
Bacillota
TAG
Leu
>WENV170065095
CDZL01014039
182231
Bacillota
TAG
Leu
>WENV170064619
CDZL01000707
653346
Bacillota
TTC
Glu
>WENV170065374
CDZL01023558
467910
Bacillota
TGC
Ala
>WENV170065303
CDZL01021206
86860
Bacillota
TGA
Ser
>WENV170065304
CDZL01021206
8223
Bacillota
GCT
Ser
>WENV170064801
CDZL01005846
779387
Bacillota
TTG
Gln
>WENV170065068
CDZL01013081
466746
Bacillota
GAA
Phe
>WENV170065182
CDZL01016783
465106
Bacillota
TGT
Thr
>WENV170064909
CDZL01008532
285831
Bacillota
GTC
Asp
>WENV170064657
CDZL01001398
285831
Bacillota
GTC
Asp
>WENV170064800
CDZL01005846
466790
Bacillota
CGG
Pro
>WENV170064918
CDZL01008534
460662
Bacillota
GCC
Gly
>WENV170064904
CDZL01008309
460662
Bacillota
GCC
Gly
>WENV170064967
CDZL01010274
270426
Bacillota
GAT
Ile
>WENV170065108
CDZL01014446
466753
Bacillota
GTT
Asn
>WENV170065342
CDZL01022859
451355
Bacillota
GAC
Val
>WENV170064952
CDZL01009938
451355
Bacillota
GAC
Val
>WENV170064837
CDZL01006554
451377
Bacillota
TAC
Val
>WENV170065373
CDZL01023558
279224
Bacillota
GAT
Ile
>WENV170065219
CDZL01018173
279224
Bacillota
GAT
Ile
>WENV170064911
CDZL01008532
468336
Bacillota
GCC
Gly
>WENV170064866
CDZL01007158
468336
Bacillota
GCC
Gly
>WENV170064945
CDZL01009901
464162
Bacillota
GTG
His
>WENV170065230
CDZL01018204
661851
Bacillota
GCA
Cys
>WENV170065161
CDZL01015842
270438
Bacillota
TCT
Arg
>WENV170065055
CDZL01012643
464161
Bacillota
TAC
Val
>WENV170065113
CDZL01014469
451352
Bacillota
GGT
Thr
>WENV170064841
CDZL01006562
451352
Bacillota
GGT
Thr
>WENV170064966
CDZL01010274
467963
Bacillota
TGC
Ala
>WENV170065110
CDZL01014469
112239
Bacillota
CAG
Leu
>WENV170065191
CDZL01017111
451398
Bacillota
TGC
Ala
>WENV170064965
CDZL01010274
88702
Bacillota
CAG
Leu
>WENV170064964
CDZL01010274
88702
Bacillota
CAG
Leu
>WENV170064931
CDZL01008946
88702
Bacillota
CAG
Leu
>WENV170064930
CDZL01008946
88702
Bacillota
CAG
Leu
>WENV170064656
CDZL01001243
73370
Bacillota
TGA
Ser
>WENV170065143
CDZL01015402
456820
Bacillota
CCA
Trp
>WENV170065228
CDZL01018204
284668
Bacillota
GTC
Asp
>WENV170065112
CDZL01014469
284668
Bacillota
GTC
Asp
>WENV170064838
CDZL01006554
284668
Bacillota
GTC
Asp
>WENV170064821
CDZL01006038
182209
Bacillota
GTA
Tyr
>WENV170065067
CDZL01013081
451472
Bacillota
GTC
Asp
>WENV170064771
CDZL01005531
451472
Bacillota
GTC
Asp
>WENV170064716
CDZL01003429
282519
Bacillota
TGG
Pro
>WENV170064947
CDZL01009901
464269
Bacillota
TTT
Lys
>WENV170064671
CDZL01001591
466782
Bacillota
CCC
Gly
>WENV170064820
CDZL01006038
464273
Bacillota
TGT
Thr
>WENV170064926
CDZL01008942
779385
Bacillota
CTG
Gln
>WENV170064799
CDZL01005846
779385
Bacillota
CTG
Gln
>WENV170065207
CDZL01017847
451357
Bacillota
CTT
Lys
>WENV170064762
CDZL01005202
451357
Bacillota
CTT
Lys
>WENV170064618
CDZL01000707
270546
Bacillota
CAT
Met
>WENV170065104
CDZL01014053
20504
Bacillota
GGA
Ser
>WENV170064707
CDZL01002922
451384
Bacillota
TGG
Pro
>WENV170065058
CDZL01012671
451375
Bacillota
GGC
Ala
>WENV170065222
CDZL01018198
451375
Bacillota
GGC
Ala
>WENV170065324
CDZL01022218
451375
Bacillota
GGC
Ala
>WENV170064989
CDZL01010892
270447
Bacillota
GTT
Asn
>WENV170064927
CDZL01008942
270447
Bacillota
GTT
Asn
>WENV170064988
CDZL01010892
653369
Bacillota
CTC
Glu
>WENV170064761
CDZL01005202
653369
Bacillota
CTC
Glu
>WENV170065253
CDZL01018923
270399
Bacillota
GAT
Ile
>WENV170065229
CDZL01018204
451376
Bacillota
GCC
Gly
>WENV170065227
CDZL01018204
451376
Bacillota
GCC
Gly
>WENV170064840
CDZL01006554
451376
Bacillota
GCC
Gly
>WENV170064836
CDZL01006554
451376
Bacillota
GCC
Gly
>WENV170065252
CDZL01018923
451344
Bacillota
TGC
Ala
>WENV170065118
CDZL01014656
653347
Bacillota
TGT
Thr
>WENV170064617
CDZL01000707
270405
Bacillota
ACG
Arg
>WENV170064634
CDZL01000908
454988
Bacillota
TGC
Ala
>WENV170065107
CDZL01014446
660224
Bacillota
GCC
Gly
>WENV170065376
CDZL01023558
658259
Bacillota
CTC
Glu
>WENV170065124
CDZL01014871
658259
Bacillota
CTC
Glu
>WENV170064946
CDZL01009901
660227
Bacillota
TTG
Gln
>WENV170064892
CDZL01007907
285826
Bacillota
CAT
Met
>WENV170064834
CDZL01006408
285826
Bacillota
CAT
Met
>WENV170064718
CDZL01003581
282408
Bacillota
CAT
Met
>WENV170064717
CDZL01003429
779402
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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