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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170065427
CDZM01001108
455828
Bacillota
TAC
Val
>WENV170065590
CDZM01008744
455828
Bacillota
TAC
Val
>WENV170065933
CDZM01024056
455828
Bacillota
TAC
Val
>WENV170065538
CDZM01006229
467910
Bacillota
TGC
Ala
>WENV170065399
CDZM01000360
460662
Bacillota
GCC
Gly
>WENV170065483
CDZM01003819
460662
Bacillota
GCC
Gly
>WENV170065679
CDZM01013051
659884
Bacillota
CTG
Gln
>WENV170065965
CDZM01024704
659884
Bacillota
CTG
Gln
>WENV170065477
CDZM01003391
273950
Bacillota
ACG
Arg
>WENV170065537
CDZM01006229
279224
Bacillota
GAT
Ile
>WENV170065503
CDZM01004692
112978
Bacillota
AAG
Leu
>WENV170065971
CDZM01025040
72851
Bacillota
TGA
Ser
>WENV170065956
CDZM01024419
455831
Bacillota
GTT
Asn
>WENV170065497
CDZM01004222
455831
Bacillota
GTT
Asn
>WENV170065422
CDZM01001108
455831
Bacillota
GTT
Asn
>WENV170065935
CDZM01024061
653349
Bacillota
GCC
Gly
>WENV170065918
CDZM01023441
653349
Bacillota
GCC
Gly
>WENV170065625
CDZM01010531
653349
Bacillota
GCC
Gly
>WENV170065585
CDZM01008405
653349
Bacillota
GCC
Gly
>WENV170065515
CDZM01005114
653349
Bacillota
GCC
Gly
>WENV170065480
CDZM01003790
653349
Bacillota
GCC
Gly
>WENV170065616
CDZM01010077
653398
Bacillota
CTC
Glu
>WENV170065615
CDZM01010077
653398
Bacillota
CTC
Glu
>WENV170065579
CDZM01007948
653398
Bacillota
CTC
Glu
>WENV170065414
CDZM01000821
653398
Bacillota
CTC
Glu
>WENV170065423
CDZM01001108
653354
Bacillota
TTC
Glu
>WENV170065967
CDZM01024705
653354
Bacillota
TTC
Glu
>WENV170065604
CDZM01009271
451375
Bacillota
GGC
Ala
>WENV170065540
CDZM01006229
658259
Bacillota
CTC
Glu
>WENV170065529
CDZM01005682
658259
Bacillota
CTC
Glu
>WENV170065567
CDZM01007193
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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