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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170065687
CDZM01013541
86857
Bacteroidota
TAA
Leu
>WENV170065636
CDZM01011328
779477
Bacteroidota
TTG
Gln
>WENV170065836
CDZM01020670
270542
Bacteroidota
CAT
Met
>WENV170065685
CDZM01013541
270412
Bacteroidota
GTT
Asn
>WENV170065506
CDZM01004713
451354
Bacteroidota
TTT
Lys
>WENV170065535
CDZM01006142
451354
Bacteroidota
TTT
Lys
>WENV170065802
CDZM01018766
451354
Bacteroidota
TTT
Lys
>WENV170065862
CDZM01021632
451354
Bacteroidota
TTT
Lys
>WENV170065897
CDZM01022407
654770
Bacteroidota
GGT
Thr
>WENV170065806
CDZM01018953
779381
Bacteroidota
CTG
Gln
>WENV170065750
CDZM01016156
30278
Bacteroidota
GGA
Ser
>WENV170065601
CDZM01009111
218000
Bacteroidota
CAG
Leu
>WENV170065599
CDZM01009111
218000
Bacteroidota
CAG
Leu
>WENV170065684
CDZM01013539
451360
Bacteroidota
CGT
Thr
>WENV170065976
CDZM01025369
458644
Bacteroidota
CCC
Gly
>WENV170065930
CDZM01023859
153684
Bacteroidota
GTA
Tyr
>WENV170065512
CDZM01005099
153684
Bacteroidota
GTA
Tyr
>WENV170065847
CDZM01021058
180313
Bacteroidota
TAG
Leu
>WENV170065786
CDZM01017568
86859
Bacteroidota
TGA
Ser
>WENV170065903
CDZM01022562
270514
Bacteroidota
GTT
Asn
>WENV170065902
CDZM01022562
270514
Bacteroidota
GTT
Asn
>WENV170065894
CDZM01022407
451389
Bacteroidota
GCC
Gly
>WENV170065892
CDZM01022407
451389
Bacteroidota
GCC
Gly
>WENV170065890
CDZM01022407
451389
Bacteroidota
GCC
Gly
>WENV170065884
CDZM01022405
451389
Bacteroidota
GCC
Gly
>WENV170065882
CDZM01022405
451389
Bacteroidota
GCC
Gly
>WENV170065763
CDZM01016400
451389
Bacteroidota
GCC
Gly
>WENV170065498
CDZM01004289
179905
Bacteroidota
TAG
Leu
>WENV170065948
CDZM01024272
277204
Bacteroidota
GTC
Asp
>WENV170065730
CDZM01015210
277204
Bacteroidota
GTC
Asp
>WENV170065505
CDZM01004713
240600
Bacteroidota
GGG
Pro
>WENV170065843
CDZM01020925
240600
Bacteroidota
GGG
Pro
>WENV170065831
CDZM01020409
779393
Bacteroidota
TTG
Gln
>WENV170065747
CDZM01016150
779393
Bacteroidota
TTG
Gln
>WENV170065608
CDZM01009876
779393
Bacteroidota
TTG
Gln
>WENV170065770
CDZM01016796
270494
Bacteroidota
CGG
Pro
>WENV170065749
CDZM01016156
782347
Bacteroidota
CTG
Gln
>WENV170065870
CDZM01021816
270491
Bacteroidota
GGC
Ala
>WENV170065509
CDZM01004727
451484
Bacteroidota
CAT
Met
>WENV170065698
CDZM01014474
451484
Bacteroidota
CAT
Met
>WENV170065866
CDZM01021639
653343
Bacteroidota
CCT
Arg
>WENV170065885
CDZM01022407
30567
Bacteroidota
GGA
Ser
>WENV170065438
CDZM01001528
653774
Bacteroidota
CAT
Met
>WENV170065975
CDZM01025369
653774
Bacteroidota
CAT
Met
>WENV170065826
CDZM01020090
153692
Bacteroidota
GTA
Tyr
>WENV170065732
CDZM01015210
153692
Bacteroidota
GTA
Tyr
>WENV170065565
CDZM01007189
30277
Bacteroidota
GGA
Ser
>WENV170065907
CDZM01022562
653350
Bacteroidota
GCA
Cys
>WENV170065789
CDZM01017748
653350
Bacteroidota
GCA
Cys
>WENV170065743
CDZM01015952
653350
Bacteroidota
GCA
Cys
>WENV170065738
CDZM01015553
653350
Bacteroidota
GCA
Cys
>WENV170065489
CDZM01004052
653350
Bacteroidota
GCA
Cys
>WENV170065588
CDZM01008509
653350
Bacteroidota
GCA
Cys
>WENV170065721
CDZM01015039
653350
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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