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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170066982
CDZN01022864
275710
Bacillota
CCG
Arg
>WENV170066511
CDZN01011100
270416
Bacillota
CAC
Val
>WENV170066255
CDZN01005727
455828
Bacillota
TAC
Val
>WENV170066149
CDZN01003497
653346
Bacillota
TTC
Glu
>WENV170066561
CDZN01011957
467910
Bacillota
TGC
Ala
>WENV170066233
CDZN01005523
86860
Bacillota
TGA
Ser
>WENV170066079
CDZN01002162
465106
Bacillota
TGT
Thr
>WENV170066498
CDZN01011064
466790
Bacillota
CGG
Pro
>WENV170067007
CDZN01023296
460662
Bacillota
GCC
Gly
>WENV170066859
CDZN01019726
279224
Bacillota
GAT
Ile
>WENV170066560
CDZN01011957
279224
Bacillota
GAT
Ile
>WENV170066189
CDZN01004653
112978
Bacillota
AAG
Leu
>WENV170067022
CDZN01023748
661851
Bacillota
GCA
Cys
>WENV170066417
CDZN01008952
112239
Bacillota
CAG
Leu
>WENV170066875
CDZN01019835
112239
Bacillota
CAG
Leu
>WENV170066884
CDZN01020433
451398
Bacillota
TGC
Ala
>WENV170066979
CDZN01022830
451398
Bacillota
TGC
Ala
>WENV170066392
CDZN01008155
153689
Bacillota
GTA
Tyr
>WENV170066980
CDZN01022830
653349
Bacillota
GCC
Gly
>WENV170066381
CDZN01008012
653349
Bacillota
GCC
Gly
>WENV170066567
CDZN01012026
653398
Bacillota
CTC
Glu
>WENV170067047
CDZN01024364
779385
Bacillota
CTG
Gln
>WENV170066281
CDZN01006425
270518
Bacillota
CAT
Met
>WENV170066148
CDZN01003497
270546
Bacillota
CAT
Met
>WENV170067032
CDZN01024002
20504
Bacillota
GGA
Ser
>WENV170066909
CDZN01020726
451384
Bacillota
TGG
Pro
>WENV170066401
CDZN01008721
451375
Bacillota
GGC
Ala
>WENV170066828
CDZN01018904
270405
Bacillota
ACG
Arg
>WENV170066463
CDZN01010281
658259
Bacillota
CTC
Glu
>WENV170066225
CDZN01005267
658259
Bacillota
CTC
Glu
>WENV170066219
CDZN01005102
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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