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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170068791
CDZP01019562
270507
Bacillota
GTC
Asp
>WENV170068644
CDZP01013762
451336
Bacillota
GAA
Phe
>WENV170068729
CDZP01017042
451336
Bacillota
GAA
Phe
>WENV170069569
CDZP01048864
275613
Bacillota
GTG
His
>WENV170069080
CDZP01031150
275710
Bacillota
CCG
Arg
>WENV170068650
CDZP01014142
653346
Bacillota
TTC
Glu
>WENV170069617
CDZP01050298
653346
Bacillota
TTC
Glu
>WENV170069237
CDZP01036268
467910
Bacillota
TGC
Ala
>WENV170069540
CDZP01047422
779387
Bacillota
TTG
Gln
>WENV170069379
CDZP01040103
465106
Bacillota
TGT
Thr
>WENV170069060
CDZP01030405
465106
Bacillota
TGT
Thr
>WENV170069000
CDZP01027260
465106
Bacillota
TGT
Thr
>WENV170069501
CDZP01044995
285831
Bacillota
GTC
Asp
>WENV170069382
CDZP01040103
285831
Bacillota
GTC
Asp
>WENV170069003
CDZP01027260
285831
Bacillota
GTC
Asp
>WENV170068386
CDZP01004667
285831
Bacillota
GTC
Asp
>WENV170068262
CDZP01000330
285831
Bacillota
GTC
Asp
>WENV170068256
CDZP01000330
270426
Bacillota
GAT
Ile
>WENV170069236
CDZP01036268
279224
Bacillota
GAT
Ile
>WENV170069503
CDZP01044995
468336
Bacillota
GCC
Gly
>WENV170068978
CDZP01026841
468336
Bacillota
GCC
Gly
>WENV170068632
CDZP01013430
275959
Bacillota
CAT
Met
>WENV170068255
CDZP01000330
467963
Bacillota
TGC
Ala
>WENV170068523
CDZP01009786
88702
Bacillota
CAG
Leu
>WENV170068522
CDZP01009786
88702
Bacillota
CAG
Leu
>WENV170068521
CDZP01009786
88702
Bacillota
CAG
Leu
>WENV170069389
CDZP01040124
465093
Bacillota
GCC
Gly
>WENV170068746
CDZP01017486
465093
Bacillota
GCC
Gly
>WENV170069634
CDZP01050736
779389
Bacillota
TCC
Gly
>WENV170069278
CDZP01037637
779389
Bacillota
TCC
Gly
>WENV170068974
CDZP01026830
779389
Bacillota
TCC
Gly
>WENV170068837
CDZP01020944
779389
Bacillota
TCC
Gly
>WENV170068507
CDZP01009348
779389
Bacillota
TCC
Gly
>WENV170068266
CDZP01000335
779389
Bacillota
TCC
Gly
>WENV170069568
CDZP01048864
275792
Bacillota
TCT
Arg
>WENV170068267
CDZP01000335
274799
Bacillota
TCT
Arg
>WENV170068884
CDZP01023187
466782
Bacillota
CCC
Gly
>WENV170068568
CDZP01012158
451414
Bacillota
TGC
Ala
>WENV170069616
CDZP01050298
270546
Bacillota
CAT
Met
>WENV170068649
CDZP01014142
270546
Bacillota
CAT
Met
>WENV170069434
CDZP01042143
451375
Bacillota
GGC
Ala
>WENV170069391
CDZP01040545
451375
Bacillota
GGC
Ala
>WENV170069330
CDZP01039278
451375
Bacillota
GGC
Ala
>WENV170069283
CDZP01037637
451375
Bacillota
GGC
Ala
>WENV170069207
CDZP01034842
451375
Bacillota
GGC
Ala
>WENV170068964
CDZP01026159
451375
Bacillota
GGC
Ala
>WENV170069539
CDZP01047322
451375
Bacillota
GGC
Ala
>WENV170069026
CDZP01028618
270399
Bacillota
GAT
Ile
>WENV170068730
CDZP01017042
451376
Bacillota
GCC
Gly
>WENV170068727
CDZP01017042
451376
Bacillota
GCC
Gly
>WENV170068645
CDZP01013762
451376
Bacillota
GCC
Gly
>WENV170069552
CDZP01048021
457194
Bacillota
TAC
Val
>WENV170069150
CDZP01033268
457194
Bacillota
TAC
Val
>WENV170068792
CDZP01019562
457194
Bacillota
TAC
Val
>WENV170068629
CDZP01013430
457194
Bacillota
TAC
Val
>WENV170068448
CDZP01007067
780500
Bacillota
CCA
Trp
>WENV170069607
CDZP01050268
454988
Bacillota
TGC
Ala
>WENV170068293
CDZP01001581
454988
Bacillota
TGC
Ala
>WENV170068524
CDZP01009804
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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