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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070588
CDZQ01029869
466803
Actinomycetota
CTT
Lys
>WENV170070360
CDZQ01022565
466795
Actinomycetota
GCC
Gly
>WENV170070852
CDZQ01037786
466795
Actinomycetota
GCC
Gly
>WENV170070854
CDZQ01037786
466795
Actinomycetota
GCC
Gly
>WENV170070856
CDZQ01037786
466795
Actinomycetota
GCC
Gly
>WENV170071378
CDZQ01054788
653358
Actinomycetota
GTT
Asn
>WENV170071379
CDZQ01054788
653358
Actinomycetota
GTT
Asn
>WENV170069956
CDZQ01007954
783181
Actinomycetota
CTG
Gln
>WENV170071082
CDZQ01045268
451418
Actinomycetota
CCT
Arg
>WENV170070011
CDZQ01010535
277197
Actinomycetota
CAT
Met
>WENV170070150
CDZQ01015555
270520
Actinomycetota
CAT
Met
>WENV170069798
CDZQ01003764
270468
Actinomycetota
GAT
Ile
>WENV170069800
CDZQ01003764
270468
Actinomycetota
GAT
Ile
>WENV170069951
CDZQ01007951
270468
Actinomycetota
GAT
Ile
>WENV170069953
CDZQ01007951
270468
Actinomycetota
GAT
Ile
>WENV170070929
CDZQ01040679
466731
Actinomycetota
GGC
Ala
>WENV170070403
CDZQ01024850
466731
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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