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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070535
CDZQ01028718
451336
Bacillota
GAA
Phe
>WENV170070539
CDZQ01028718
451336
Bacillota
GAA
Phe
>WENV170070078
CDZQ01013635
458652
Bacillota
GCC
Gly
>WENV170070176
CDZQ01016031
458652
Bacillota
GCC
Gly
>WENV170071507
CDZQ01058415
458652
Bacillota
GCC
Gly
>WENV170070337
CDZQ01021918
72688
Bacillota
TGA
Ser
>WENV170070006
CDZQ01010435
465106
Bacillota
TGT
Thr
>WENV170070054
CDZQ01012751
465106
Bacillota
TGT
Thr
>WENV170070108
CDZQ01014258
465106
Bacillota
TGT
Thr
>WENV170070198
CDZQ01016993
465106
Bacillota
TGT
Thr
>WENV170070550
CDZQ01028965
465106
Bacillota
TGT
Thr
>WENV170070867
CDZQ01038374
465106
Bacillota
TGT
Thr
>WENV170069962
CDZQ01007967
285831
Bacillota
GTC
Asp
>WENV170071415
CDZQ01056338
285831
Bacillota
GTC
Asp
>WENV170070783
CDZQ01036032
460662
Bacillota
GCC
Gly
>WENV170071329
CDZQ01053476
460662
Bacillota
GCC
Gly
>WENV170071152
CDZQ01047902
270426
Bacillota
GAT
Ile
>WENV170070646
CDZQ01031850
270426
Bacillota
GAT
Ile
>WENV170069795
CDZQ01003699
270426
Bacillota
GAT
Ile
>WENV170071535
CDZQ01060071
451367
Bacillota
TAC
Val
>WENV170071506
CDZQ01058415
451367
Bacillota
TAC
Val
>WENV170070805
CDZQ01036392
451367
Bacillota
TAC
Val
>WENV170070079
CDZQ01013635
451367
Bacillota
TAC
Val
>WENV170070537
CDZQ01028718
451377
Bacillota
TAC
Val
>WENV170070533
CDZQ01028718
451377
Bacillota
TAC
Val
>WENV170070942
CDZQ01041116
279224
Bacillota
GAT
Ile
>WENV170069992
CDZQ01009577
279224
Bacillota
GAT
Ile
>WENV170071417
CDZQ01056338
468336
Bacillota
GCC
Gly
>WENV170070017
CDZQ01010604
468336
Bacillota
GCC
Gly
>WENV170069794
CDZQ01003699
467963
Bacillota
TGC
Ala
>WENV170070623
CDZQ01030946
88702
Bacillota
CAG
Leu
>WENV170070622
CDZQ01030946
88702
Bacillota
CAG
Leu
>WENV170070621
CDZQ01030946
88702
Bacillota
CAG
Leu
>WENV170070380
CDZQ01023940
88702
Bacillota
CAG
Leu
>WENV170070379
CDZQ01023940
88702
Bacillota
CAG
Leu
>WENV170070378
CDZQ01023940
88702
Bacillota
CAG
Leu
>WENV170070540
CDZQ01028718
465093
Bacillota
GCC
Gly
>WENV170070536
CDZQ01028718
465093
Bacillota
GCC
Gly
>WENV170070532
CDZQ01028718
465093
Bacillota
GCC
Gly
>WENV170071424
CDZQ01056349
779389
Bacillota
TCC
Gly
>WENV170070332
CDZQ01021918
658733
Bacillota
GCC
Gly
>WENV170070175
CDZQ01016031
451395
Bacillota
GAA
Phe
>WENV170070077
CDZQ01013635
451395
Bacillota
GAA
Phe
>WENV170070719
CDZQ01034385
467075
Bacillota
TGC
Ala
>WENV170069983
CDZQ01008985
451375
Bacillota
GGC
Ala
>WENV170069982
CDZQ01008985
451375
Bacillota
GGC
Ala
>WENV170069981
CDZQ01008985
451375
Bacillota
GGC
Ala
>WENV170069878
CDZQ01005695
451375
Bacillota
GGC
Ala
>WENV170069864
CDZQ01005177
451375
Bacillota
GGC
Ala
>WENV170069699
CDZQ01000964
451375
Bacillota
GGC
Ala
>WENV170070320
CDZQ01021447
451375
Bacillota
GGC
Ala
>WENV170071068
CDZQ01045257
451375
Bacillota
GGC
Ala
>WENV170071084
CDZQ01045297
451375
Bacillota
GGC
Ala
>WENV170071132
CDZQ01046693
451375
Bacillota
GGC
Ala
>WENV170071133
CDZQ01046693
451375
Bacillota
GGC
Ala
>WENV170071134
CDZQ01046693
451375
Bacillota
GGC
Ala
>WENV170071323
CDZQ01053091
451375
Bacillota
GGC
Ala
>WENV170071324
CDZQ01053091
451375
Bacillota
GGC
Ala
>WENV170071453
CDZQ01057275
451375
Bacillota
GGC
Ala
>WENV170071475
CDZQ01057874
451375
Bacillota
GGC
Ala
>WENV170071487
CDZQ01058087
451375
Bacillota
GGC
Ala
>WENV170071569
CDZQ01060830
451375
Bacillota
GGC
Ala
>WENV170071570
CDZQ01060830
451375
Bacillota
GGC
Ala
>WENV170070749
CDZQ01035069
461574
Bacillota
TGT
Thr
>WENV170070708
CDZQ01033557
461574
Bacillota
TGT
Thr
>WENV170071116
CDZQ01046174
270399
Bacillota
GAT
Ile
>WENV170070644
CDZQ01031847
270399
Bacillota
GAT
Ile
>WENV170070564
CDZQ01029341
451334
Bacillota
TGT
Thr
>WENV170071536
CDZQ01060071
292926
Bacillota
GTC
Asp
>WENV170070510
CDZQ01027921
454988
Bacillota
TGC
Ala
>WENV170070434
CDZQ01026497
658259
Bacillota
CTC
Glu
>WENV170070073
CDZQ01013252
658259
Bacillota
CTC
Glu
>WENV170070223
CDZQ01018062
285826
Bacillota
CAT
Met
>WENV170070195
CDZQ01016990
285826
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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