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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170071778
CDZR01005773
457039
Bacillota
GAA
Phe
>WENV170072059
CDZR01018404
457039
Bacillota
GAA
Phe
>WENV170072739
CDZR01048535
468330
Bacillota
GTT
Asn
>WENV170072183
CDZR01024677
451336
Bacillota
GAA
Phe
>WENV170072163
CDZR01023883
458652
Bacillota
GCC
Gly
>WENV170072167
CDZR01023883
458652
Bacillota
GCC
Gly
>WENV170072171
CDZR01023883
458652
Bacillota
GCC
Gly
>WENV170072189
CDZR01024739
458652
Bacillota
GCC
Gly
>WENV170072193
CDZR01024739
458652
Bacillota
GCC
Gly
>WENV170072281
CDZR01028163
458652
Bacillota
GCC
Gly
>WENV170072931
CDZR01055635
275613
Bacillota
GTG
His
>WENV170072854
CDZR01052835
275710
Bacillota
CCG
Arg
>WENV170072418
CDZR01035052
275710
Bacillota
CCG
Arg
>WENV170072021
CDZR01017073
270416
Bacillota
CAC
Val
>WENV170071938
CDZR01013104
270416
Bacillota
CAC
Val
>WENV170072035
CDZR01017320
183038
Bacillota
GTA
Tyr
>WENV170072762
CDZR01049475
270436
Bacillota
GTG
His
>WENV170072911
CDZR01054430
86860
Bacillota
TGA
Ser
>WENV170071871
CDZR01009916
86860
Bacillota
TGA
Ser
>WENV170072828
CDZR01051386
8223
Bacillota
GCT
Ser
>WENV170072151
CDZR01022756
779387
Bacillota
TTG
Gln
>WENV170072137
CDZR01021964
779387
Bacillota
TTG
Gln
>WENV170072099
CDZR01020000
779387
Bacillota
TTG
Gln
>WENV170072103
CDZR01020366
465106
Bacillota
TGT
Thr
>WENV170071861
CDZR01009264
465106
Bacillota
TGT
Thr
>WENV170071974
CDZR01014609
285831
Bacillota
GTC
Asp
>WENV170071668
CDZR01002828
466790
Bacillota
CGG
Pro
>WENV170072251
CDZR01027369
451373
Bacillota
TTT
Lys
>WENV170072257
CDZR01027571
270426
Bacillota
GAT
Ile
>WENV170071860
CDZR01009256
270426
Bacillota
GAT
Ile
>WENV170072345
CDZR01030990
451367
Bacillota
TAC
Val
>WENV170071822
CDZR01007780
451367
Bacillota
TAC
Val
>WENV170071598
CDZR01000488
451367
Bacillota
TAC
Val
>WENV170073020
CDZR01060177
451355
Bacillota
GAC
Val
>WENV170072954
CDZR01056857
451355
Bacillota
GAC
Val
>WENV170072652
CDZR01046063
451355
Bacillota
GAC
Val
>WENV170072710
CDZR01047721
653367
Bacillota
CTC
Glu
>WENV170072621
CDZR01043880
653367
Bacillota
CTC
Glu
>WENV170071691
CDZR01003750
653367
Bacillota
CTC
Glu
>WENV170072174
CDZR01023944
468336
Bacillota
GCC
Gly
>WENV170072901
CDZR01054227
661851
Bacillota
GCA
Cys
>WENV170071926
CDZR01012446
72851
Bacillota
TGA
Ser
>WENV170072577
CDZR01041735
270438
Bacillota
TCT
Arg
>WENV170072534
CDZR01040061
270438
Bacillota
TCT
Arg
>WENV170071744
CDZR01005160
270438
Bacillota
TCT
Arg
>WENV170072991
CDZR01059260
451352
Bacillota
GGT
Thr
>WENV170072217
CDZR01026127
451352
Bacillota
GGT
Thr
>WENV170072087
CDZR01019743
451352
Bacillota
GGT
Thr
>WENV170071798
CDZR01006794
275959
Bacillota
CAT
Met
>WENV170071581
CDZR01000001
275959
Bacillota
CAT
Met
>WENV170071859
CDZR01009256
467963
Bacillota
TGC
Ala
>WENV170072496
CDZR01038444
112239
Bacillota
CAG
Leu
>WENV170071921
CDZR01012434
451398
Bacillota
TGC
Ala
>WENV170071917
CDZR01012085
88702
Bacillota
CAG
Leu
>WENV170071916
CDZR01012085
88702
Bacillota
CAG
Leu
>WENV170071610
CDZR01000941
465093
Bacillota
GCC
Gly
>WENV170072966
CDZR01057249
153689
Bacillota
GTA
Tyr
>WENV170072876
CDZR01053209
779389
Bacillota
TCC
Gly
>WENV170072254
CDZR01027390
779389
Bacillota
TCC
Gly
>WENV170072071
CDZR01018421
779389
Bacillota
TCC
Gly
>WENV170072053
CDZR01017913
779389
Bacillota
TCC
Gly
>WENV170071779
CDZR01005773
779389
Bacillota
TCC
Gly
>WENV170072930
CDZR01055635
275792
Bacillota
TCT
Arg
>WENV170072072
CDZR01018421
275792
Bacillota
TCT
Arg
>WENV170072775
CDZR01049750
284668
Bacillota
GTC
Asp
>WENV170072086
CDZR01019743
284668
Bacillota
GTC
Asp
>WENV170071912
CDZR01011963
287917
Bacillota
GAT
Ile
>WENV170071652
CDZR01002354
270452
Bacillota
GAT
Ile
>WENV170072801
CDZR01050941
779385
Bacillota
CTG
Gln
>WENV170072704
CDZR01047366
779385
Bacillota
CTG
Gln
>WENV170072983
CDZR01058711
779385
Bacillota
CTG
Gln
>WENV170071667
CDZR01002828
779385
Bacillota
CTG
Gln
>WENV170071911
CDZR01011870
779385
Bacillota
CTG
Gln
>WENV170072182
CDZR01024623
779385
Bacillota
CTG
Gln
>WENV170072113
CDZR01020836
451414
Bacillota
TGC
Ala
>WENV170071978
CDZR01014723
451414
Bacillota
TGC
Ala
>WENV170071919
CDZR01012404
20504
Bacillota
GGA
Ser
>WENV170072908
CDZR01054247
73357
Bacillota
TGA
Ser
>WENV170072506
CDZR01039072
467075
Bacillota
TGC
Ala
>WENV170072356
CDZR01031767
466773
Bacillota
GGC
Ala
>WENV170072055
CDZR01018348
466773
Bacillota
GGC
Ala
>WENV170072291
CDZR01029167
451375
Bacillota
GGC
Ala
>WENV170072796
CDZR01050424
270447
Bacillota
GTT
Asn
>WENV170072716
CDZR01047893
270447
Bacillota
GTT
Asn
>WENV170072795
CDZR01050424
653369
Bacillota
CTC
Glu
>WENV170072715
CDZR01047893
653369
Bacillota
CTC
Glu
>WENV170071909
CDZR01011695
653369
Bacillota
CTC
Glu
>WENV170071881
CDZR01010560
653369
Bacillota
CTC
Glu
>WENV170072916
CDZR01055042
458649
Bacillota
GCC
Gly
>WENV170072555
CDZR01040779
457194
Bacillota
TAC
Val
>WENV170071795
CDZR01006794
457194
Bacillota
TAC
Val
>WENV170072237
CDZR01026778
451334
Bacillota
TGT
Thr
>WENV170072919
CDZR01055170
451334
Bacillota
TGT
Thr
>WENV170072307
CDZR01029637
653347
Bacillota
TGT
Thr
>WENV170071686
CDZR01003442
653347
Bacillota
TGT
Thr
>WENV170072292
CDZR01029382
270405
Bacillota
ACG
Arg
>WENV170072244
CDZR01027167
270405
Bacillota
ACG
Arg
>WENV170071683
CDZR01003380
270405
Bacillota
ACG
Arg
>WENV170072660
CDZR01046124
454988
Bacillota
TGC
Ala
>WENV170072524
CDZR01039886
454988
Bacillota
TGC
Ala
>WENV170071653
CDZR01002354
454988
Bacillota
TGC
Ala
>WENV170072981
CDZR01058348
284784
Bacillota
GAT
Ile
>WENV170073021
CDZR01060240
285826
Bacillota
CAT
Met
>WENV170072383
CDZR01032405
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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