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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170073476
CDZS01017208
457039
Bacillota
GAA
Phe
>WENV170073218
CDZS01006771
275613
Bacillota
GTG
His
>WENV170073886
CDZS01033550
275710
Bacillota
CCG
Arg
>WENV170073722
CDZS01027132
270416
Bacillota
CAC
Val
>WENV170074156
CDZS01042424
270416
Bacillota
CAC
Val
>WENV170073126
CDZS01003209
183038
Bacillota
GTA
Tyr
>WENV170073278
CDZS01009575
455828
Bacillota
TAC
Val
>WENV170073848
CDZS01032118
653346
Bacillota
TTC
Glu
>WENV170074172
CDZS01042566
270436
Bacillota
GTG
His
>WENV170074127
CDZS01041222
270436
Bacillota
GTG
His
>WENV170073322
CDZS01011019
270436
Bacillota
GTG
His
>WENV170074155
CDZS01042262
8223
Bacillota
GCT
Ser
>WENV170074323
CDZS01048036
270488
Bacillota
GTC
Asp
>WENV170073447
CDZS01016366
270488
Bacillota
GTC
Asp
>WENV170073746
CDZS01028339
779387
Bacillota
TTG
Gln
>WENV170073073
CDZS01002184
779387
Bacillota
TTG
Gln
>WENV170074316
CDZS01048005
655659
Bacillota
CTG
Gln
>WENV170073724
CDZS01027301
465106
Bacillota
TGT
Thr
>WENV170073461
CDZS01016497
285831
Bacillota
GTC
Asp
>WENV170073414
CDZS01015728
285831
Bacillota
GTC
Asp
>WENV170074216
CDZS01044666
466790
Bacillota
CGG
Pro
>WENV170073755
CDZS01028866
466790
Bacillota
CGG
Pro
>WENV170073324
CDZS01011019
451373
Bacillota
TTT
Lys
>WENV170074190
CDZS01043492
270426
Bacillota
GAT
Ile
>WENV170073741
CDZS01028082
270426
Bacillota
GAT
Ile
>WENV170073441
CDZS01016279
270426
Bacillota
GAT
Ile
>WENV170073894
CDZS01033606
451367
Bacillota
TAC
Val
>WENV170073373
CDZS01013620
451367
Bacillota
TAC
Val
>WENV170074234
CDZS01045266
451355
Bacillota
GAC
Val
>WENV170074149
CDZS01042161
653367
Bacillota
CTC
Glu
>WENV170073652
CDZS01024023
653367
Bacillota
CTC
Glu
>WENV170073604
CDZS01021859
653367
Bacillota
CTC
Glu
>WENV170074508
CDZS01055569
468336
Bacillota
GCC
Gly
>WENV170073463
CDZS01016497
468336
Bacillota
GCC
Gly
>WENV170073136
CDZS01004106
468336
Bacillota
GCC
Gly
>WENV170074304
CDZS01047656
270438
Bacillota
TCT
Arg
>WENV170073982
CDZS01036022
270438
Bacillota
TCT
Arg
>WENV170073559
CDZS01020110
270438
Bacillota
TCT
Arg
>WENV170073475
CDZS01017181
451352
Bacillota
GGT
Thr
>WENV170073328
CDZS01011142
451352
Bacillota
GGT
Thr
>WENV170073451
CDZS01016366
275959
Bacillota
CAT
Met
>WENV170073160
CDZS01004549
275959
Bacillota
CAT
Met
>WENV170073740
CDZS01028082
467963
Bacillota
TGC
Ala
>WENV170073867
CDZS01032649
112239
Bacillota
CAG
Leu
>WENV170073905
CDZS01034071
88702
Bacillota
CAG
Leu
>WENV170073745
CDZS01028326
88702
Bacillota
CAG
Leu
>WENV170073116
CDZS01002903
88702
Bacillota
CAG
Leu
>WENV170073115
CDZS01002903
88702
Bacillota
CAG
Leu
>WENV170073114
CDZS01002903
88702
Bacillota
CAG
Leu
>WENV170074479
CDZS01054247
465093
Bacillota
GCC
Gly
>WENV170074152
CDZS01042209
86865
Bacillota
AAG
Leu
>WENV170074151
CDZS01042209
86865
Bacillota
AAG
Leu
>WENV170074032
CDZS01038921
286459
Bacillota
CAT
Met
>WENV170074318
CDZS01048005
779389
Bacillota
TCC
Gly
>WENV170074125
CDZS01041222
779389
Bacillota
TCC
Gly
>WENV170073852
CDZS01032184
779389
Bacillota
TCC
Gly
>WENV170073382
CDZS01013923
779389
Bacillota
TCC
Gly
>WENV170073217
CDZS01006771
275792
Bacillota
TCT
Arg
>WENV170073988
CDZS01036104
466782
Bacillota
CCC
Gly
>WENV170073598
CDZS01021374
179909
Bacillota
GTA
Tyr
>WENV170074158
CDZS01042509
779385
Bacillota
CTG
Gln
>WENV170074325
CDZS01048133
779385
Bacillota
CTG
Gln
>WENV170074486
CDZS01054762
451406
Bacillota
CTT
Lys
>WENV170073223
CDZS01006780
451406
Bacillota
CTT
Lys
>WENV170074282
CDZS01047082
451414
Bacillota
TGC
Ala
>WENV170073376
CDZS01013891
451414
Bacillota
TGC
Ala
>WENV170074512
CDZS01055662
270546
Bacillota
CAT
Met
>WENV170073521
CDZS01019034
467075
Bacillota
TGC
Ala
>WENV170073290
CDZS01009979
466773
Bacillota
GGC
Ala
>WENV170073314
CDZS01010702
451375
Bacillota
GGC
Ala
>WENV170074109
CDZS01041145
270447
Bacillota
GTT
Asn
>WENV170073582
CDZS01020880
270447
Bacillota
GTT
Asn
>WENV170073133
CDZS01003849
270447
Bacillota
GTT
Asn
>WENV170073489
CDZS01017505
653369
Bacillota
CTC
Glu
>WENV170073474
CDZS01017135
451376
Bacillota
GCC
Gly
>WENV170073526
CDZS01019052
458649
Bacillota
GCC
Gly
>WENV170073525
CDZS01019052
458649
Bacillota
GCC
Gly
>WENV170073523
CDZS01019052
458649
Bacillota
GCC
Gly
>WENV170073782
CDZS01029892
457194
Bacillota
TAC
Val
>WENV170073780
CDZS01029892
457194
Bacillota
TAC
Val
>WENV170073778
CDZS01029892
457194
Bacillota
TAC
Val
>WENV170073733
CDZS01027776
457194
Bacillota
TAC
Val
>WENV170073448
CDZS01016366
457194
Bacillota
TAC
Val
>WENV170073320
CDZS01011018
457194
Bacillota
TAC
Val
>WENV170073318
CDZS01011018
457194
Bacillota
TAC
Val
>WENV170073157
CDZS01004549
457194
Bacillota
TAC
Val
>WENV170074243
CDZS01045575
154348
Bacillota
CAG
Leu
>WENV170073981
CDZS01036001
270405
Bacillota
ACG
Arg
>WENV170073274
CDZS01009564
270405
Bacillota
ACG
Arg
>WENV170074061
CDZS01039784
780500
Bacillota
CCA
Trp
>WENV170073793
CDZS01030744
780500
Bacillota
CCA
Trp
>WENV170074445
CDZS01052638
454988
Bacillota
TGC
Ala
>WENV170073267
CDZS01009008
454988
Bacillota
TGC
Ala
>WENV170073787
CDZS01030268
115212
Bacillota
TAA
Leu
>WENV170073127
CDZS01003209
115212
Bacillota
TAA
Leu
>WENV170073099
CDZS01002709
284784
Bacillota
GAT
Ile
>WENV170073801
CDZS01031150
285826
Bacillota
CAT
Met
>WENV170073643
CDZS01023562
285826
Bacillota
CAT
Met
>WENV170074317
CDZS01048005
451372
Bacillota
GAA
Phe
>WENV170074153
CDZS01042209
113007
Bacillota
CAG
Leu
>WENV170073637
CDZS01023111
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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