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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077451
CDZU01032472
451658
Actinomycetota
CCG
Arg
>WENV170076404
CDZU01002321
451405
Actinomycetota
CTC
Glu
>WENV170077674
CDZU01038006
451655
Actinomycetota
CCA
Trp
>WENV170076996
CDZU01018492
779444
Actinomycetota
TTG
Gln
>WENV170076405
CDZU01002321
653368
Actinomycetota
CTG
Gln
>WENV170077514
CDZU01033965
86861
Actinomycetota
TGA
Ser
>WENV170077112
CDZU01022071
783181
Actinomycetota
CTG
Gln
>WENV170077015
CDZU01019223
30300
Actinomycetota
GAG
Leu
>WENV170076686
CDZU01010167
270520
Actinomycetota
CAT
Met
>WENV170076845
CDZU01014665
270708
Actinomycetota
CTT
Lys
>WENV170077777
CDZU01041096
270706
Actinomycetota
TGT
Thr
>WENV170076829
CDZU01014009
270468
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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