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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170079796
CDZW01019620
451336
Bacillota
GAA
Phe
>WENV170079457
CDZW01005078
458652
Bacillota
GCC
Gly
>WENV170079676
CDZW01013779
275710
Bacillota
CCG
Arg
>WENV170079918
CDZW01024411
275710
Bacillota
CCG
Arg
>WENV170079716
CDZW01015875
270416
Bacillota
CAC
Val
>WENV170079790
CDZW01019303
270416
Bacillota
CAC
Val
>WENV170080184
CDZW01034009
270416
Bacillota
CAC
Val
>WENV170079521
CDZW01007972
455828
Bacillota
TAC
Val
>WENV170080366
CDZW01043608
653346
Bacillota
TTC
Glu
>WENV170080277
CDZW01038300
653346
Bacillota
TTC
Glu
>WENV170079772
CDZW01018454
270436
Bacillota
GTG
His
>WENV170079876
CDZW01022490
86860
Bacillota
TGA
Ser
>WENV170079510
CDZW01007515
86860
Bacillota
TGA
Ser
>WENV170079854
CDZW01021309
8223
Bacillota
GCT
Ser
>WENV170079511
CDZW01007515
8223
Bacillota
GCT
Ser
>WENV170080438
CDZW01046218
779387
Bacillota
TTG
Gln
>WENV170080413
CDZW01045241
779387
Bacillota
TTG
Gln
>WENV170080271
CDZW01038181
465106
Bacillota
TGT
Thr
>WENV170079502
CDZW01007178
465106
Bacillota
TGT
Thr
>WENV170079632
CDZW01011974
285831
Bacillota
GTC
Asp
>WENV170080229
CDZW01036215
466790
Bacillota
CGG
Pro
>WENV170079428
CDZW01004301
466790
Bacillota
CGG
Pro
>WENV170079910
CDZW01024036
451373
Bacillota
TTT
Lys
>WENV170079816
CDZW01020005
451373
Bacillota
TTT
Lys
>WENV170080324
CDZW01041255
270426
Bacillota
GAT
Ile
>WENV170079802
CDZW01019666
270426
Bacillota
GAT
Ile
>WENV170079456
CDZW01005078
451367
Bacillota
TAC
Val
>WENV170079420
CDZW01004008
451367
Bacillota
TAC
Val
>WENV170080450
CDZW01046598
451355
Bacillota
GAC
Val
>WENV170079561
CDZW01009131
451355
Bacillota
GAC
Val
>WENV170079383
CDZW01002867
451355
Bacillota
GAC
Val
>WENV170080349
CDZW01042318
451377
Bacillota
TAC
Val
>WENV170080346
CDZW01042063
653367
Bacillota
CTC
Glu
>WENV170080038
CDZW01029840
653367
Bacillota
CTC
Glu
>WENV170079574
CDZW01009572
653367
Bacillota
CTC
Glu
>WENV170079311
CDZW01000443
653367
Bacillota
CTC
Glu
>WENV170080440
CDZW01046218
661851
Bacillota
GCA
Cys
>WENV170080444
CDZW01046250
270438
Bacillota
TCT
Arg
>WENV170079744
CDZW01016982
270438
Bacillota
TCT
Arg
>WENV170080097
CDZW01031180
451352
Bacillota
GGT
Thr
>WENV170079870
CDZW01021959
451352
Bacillota
GGT
Thr
>WENV170079863
CDZW01021598
451352
Bacillota
GGT
Thr
>WENV170079682
CDZW01013990
275959
Bacillota
CAT
Met
>WENV170080319
CDZW01041076
112239
Bacillota
CAG
Leu
>WENV170080477
CDZW01047493
86865
Bacillota
AAG
Leu
>WENV170079555
CDZW01008768
86865
Bacillota
AAG
Leu
>WENV170080384
CDZW01044419
779389
Bacillota
TCC
Gly
>WENV170080041
CDZW01029867
779389
Bacillota
TCC
Gly
>WENV170079770
CDZW01018454
779389
Bacillota
TCC
Gly
>WENV170080350
CDZW01042318
284668
Bacillota
GTC
Asp
>WENV170079869
CDZW01021959
284668
Bacillota
GTC
Asp
>WENV170080431
CDZW01045585
466782
Bacillota
CCC
Gly
>WENV170080456
CDZW01046661
179909
Bacillota
GTA
Tyr
>WENV170080228
CDZW01036215
779385
Bacillota
CTG
Gln
>WENV170080118
CDZW01031819
779385
Bacillota
CTG
Gln
>WENV170079427
CDZW01004301
779385
Bacillota
CTG
Gln
>WENV170079414
CDZW01003828
779385
Bacillota
CTG
Gln
>WENV170080481
CDZW01047717
451414
Bacillota
TGC
Ala
>WENV170079840
CDZW01020758
451414
Bacillota
TGC
Ala
>WENV170079447
CDZW01005065
451414
Bacillota
TGC
Ala
>WENV170080276
CDZW01038300
270546
Bacillota
CAT
Met
>WENV170080484
CDZW01047827
20504
Bacillota
GGA
Ser
>WENV170080113
CDZW01031634
20504
Bacillota
GGA
Ser
>WENV170079438
CDZW01004692
451384
Bacillota
TGG
Pro
>WENV170080294
CDZW01040039
467075
Bacillota
TGC
Ala
>WENV170080001
CDZW01028281
467075
Bacillota
TGC
Ala
>WENV170080293
CDZW01040030
466773
Bacillota
GGC
Ala
>WENV170079426
CDZW01004215
466773
Bacillota
GGC
Ala
>WENV170079399
CDZW01003591
466773
Bacillota
GGC
Ala
>WENV170080116
CDZW01031800
451375
Bacillota
GGC
Ala
>WENV170079681
CDZW01013987
451375
Bacillota
GGC
Ala
>WENV170080211
CDZW01035510
270447
Bacillota
GTT
Asn
>WENV170079595
CDZW01010102
270447
Bacillota
GTT
Asn
>WENV170079562
CDZW01009157
270447
Bacillota
GTT
Asn
>WENV170079507
CDZW01007268
270447
Bacillota
GTT
Asn
>WENV170079506
CDZW01007268
653369
Bacillota
CTC
Glu
>WENV170079743
CDZW01016967
451376
Bacillota
GCC
Gly
>WENV170079797
CDZW01019620
451376
Bacillota
GCC
Gly
>WENV170080235
CDZW01036435
451376
Bacillota
GCC
Gly
>WENV170080348
CDZW01042318
451376
Bacillota
GCC
Gly
>WENV170080439
CDZW01046218
451376
Bacillota
GCC
Gly
>WENV170079485
CDZW01006777
653373
Bacillota
TTC
Glu
>WENV170079782
CDZW01018873
457194
Bacillota
TAC
Val
>WENV170079489
CDZW01006777
457194
Bacillota
TAC
Val
>WENV170079677
CDZW01013918
451334
Bacillota
TGT
Thr
>WENV170079313
CDZW01000504
653347
Bacillota
TGT
Thr
>WENV170079780
CDZW01018798
780500
Bacillota
CCA
Trp
>WENV170079688
CDZW01014364
284784
Bacillota
GAT
Ile
>WENV170080040
CDZW01029867
451372
Bacillota
GAA
Phe
>WENV170079815
CDZW01020005
451372
Bacillota
GAA
Phe
>WENV170080024
CDZW01029140
113007
Bacillota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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