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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170083473
CEAA01034464
451336
Bacillota
GAA
Phe
>WENV170083365
CEAA01030465
458652
Bacillota
GCC
Gly
>WENV170083370
CEAA01030527
275613
Bacillota
GTG
His
>WENV170083844
CEAA01047757
275710
Bacillota
CCG
Arg
>WENV170083082
CEAA01020500
270416
Bacillota
CAC
Val
>WENV170083917
CEAA01050214
270416
Bacillota
CAC
Val
>WENV170083659
CEAA01040934
455828
Bacillota
TAC
Val
>WENV170082600
CEAA01001848
653346
Bacillota
TTC
Glu
>WENV170082849
CEAA01010655
86860
Bacillota
TGA
Ser
>WENV170083201
CEAA01026068
8223
Bacillota
GCT
Ser
>WENV170082850
CEAA01010655
8223
Bacillota
GCT
Ser
>WENV170082692
CEAA01005220
779387
Bacillota
TTG
Gln
>WENV170082569
CEAA01000741
779387
Bacillota
TTG
Gln
>WENV170083228
CEAA01027261
465106
Bacillota
TGT
Thr
>WENV170082908
CEAA01012824
465106
Bacillota
TGT
Thr
>WENV170083593
CEAA01038428
466790
Bacillota
CGG
Pro
>WENV170083484
CEAA01034956
466790
Bacillota
CGG
Pro
>WENV170083837
CEAA01047755
270426
Bacillota
GAT
Ile
>WENV170083785
CEAA01045690
270426
Bacillota
GAT
Ile
>WENV170082746
CEAA01006895
451367
Bacillota
TAC
Val
>WENV170082670
CEAA01004317
451367
Bacillota
TAC
Val
>WENV170083364
CEAA01030293
451355
Bacillota
GAC
Val
>WENV170083868
CEAA01048670
653367
Bacillota
CTC
Glu
>WENV170082785
CEAA01008947
653367
Bacillota
CTC
Glu
>WENV170083556
CEAA01036904
270438
Bacillota
TCT
Arg
>WENV170082772
CEAA01008527
451352
Bacillota
GGT
Thr
>WENV170083053
CEAA01018959
451352
Bacillota
GGT
Thr
>WENV170083788
CEAA01045725
451352
Bacillota
GGT
Thr
>WENV170083967
CEAA01052435
112239
Bacillota
CAG
Leu
>WENV170082927
CEAA01013649
112239
Bacillota
CAG
Leu
>WENV170083369
CEAA01030527
275792
Bacillota
TCT
Arg
>WENV170083472
CEAA01034464
284668
Bacillota
GTC
Asp
>WENV170083052
CEAA01018959
284668
Bacillota
GTC
Asp
>WENV170083656
CEAA01040906
466782
Bacillota
CCC
Gly
>WENV170083225
CEAA01027043
466782
Bacillota
CCC
Gly
>WENV170082951
CEAA01014548
179909
Bacillota
GTA
Tyr
>WENV170083985
CEAA01052665
779385
Bacillota
CTG
Gln
>WENV170083796
CEAA01045850
779385
Bacillota
CTG
Gln
>WENV170083592
CEAA01038428
779385
Bacillota
CTG
Gln
>WENV170083483
CEAA01034956
779385
Bacillota
CTG
Gln
>WENV170083888
CEAA01049427
270546
Bacillota
CAT
Met
>WENV170083528
CEAA01036806
20504
Bacillota
GGA
Ser
>WENV170083054
CEAA01018959
451384
Bacillota
TGG
Pro
>WENV170083799
CEAA01046099
466773
Bacillota
GGC
Ala
>WENV170083510
CEAA01035674
466773
Bacillota
GGC
Ala
>WENV170083765
CEAA01044826
451375
Bacillota
GGC
Ala
>WENV170083634
CEAA01039714
451375
Bacillota
GGC
Ala
>WENV170083241
CEAA01027598
451375
Bacillota
GGC
Ala
>WENV170082994
CEAA01016703
451375
Bacillota
GGC
Ala
>WENV170082583
CEAA01001324
451375
Bacillota
GGC
Ala
>WENV170083712
CEAA01042633
270447
Bacillota
GTT
Asn
>WENV170083688
CEAA01042217
270447
Bacillota
GTT
Asn
>WENV170082816
CEAA01009808
30533
Bacillota
GCT
Ser
>WENV170083711
CEAA01042633
653369
Bacillota
CTC
Glu
>WENV170084024
CEAA01054001
451376
Bacillota
GCC
Gly
>WENV170083474
CEAA01034464
451376
Bacillota
GCC
Gly
>WENV170083957
CEAA01051925
653373
Bacillota
TTC
Glu
>WENV170083133
CEAA01023103
457194
Bacillota
TAC
Val
>WENV170083534
CEAA01036815
457194
Bacillota
TAC
Val
>WENV170083454
CEAA01033999
451334
Bacillota
TGT
Thr
>WENV170083107
CEAA01021708
653347
Bacillota
TGT
Thr
>WENV170082804
CEAA01009397
270405
Bacillota
ACG
Arg
>WENV170083642
CEAA01040211
780500
Bacillota
CCA
Trp
>WENV170082702
CEAA01005623
780500
Bacillota
CCA
Trp
>WENV170083212
CEAA01026488
284784
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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