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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170083035
CEAA01018060
468335
Verrucomicrobiota
CCA
Trp
>WENV170083865
CEAA01048592
469002
Verrucomicrobiota
CGC
Ala
>WENV170083576
CEAA01037643
468342
Verrucomicrobiota
>WENV170083569
CEAA01037643
228818
Verrucomicrobiota
CAA
Leu
>WENV170082962
CEAA01014986
662558
Verrucomicrobiota
GCC
Gly
>WENV170083010
CEAA01017163
662558
Verrucomicrobiota
GCC
Gly
>WENV170083284
CEAA01028785
784158
Verrucomicrobiota
TCC
Gly
>WENV170083574
CEAA01037643
663148
Verrucomicrobiota
CCT
Arg
>WENV170083400
CEAA01031390
663191
Verrucomicrobiota
TTG
Gln
>WENV170083994
CEAA01053338
115335
Verrucomicrobiota
CAG
Leu
>WENV170083258
CEAA01028435
155851
Verrucomicrobiota
GTA
Tyr
>WENV170083575
CEAA01037643
156064
Verrucomicrobiota
TAA
Leu
>WENV170082895
CEAA01012378
662766
Verrucomicrobiota
CTG
Gln
>WENV170083570
CEAA01037643
183416
Verrucomicrobiota
TAG
Leu
>WENV170083858
CEAA01048112
662760
Verrucomicrobiota
CAC
Val
>WENV170083577
CEAA01037643
12844
Verrucomicrobiota
GCT
Ser
>WENV170082935
CEAA01013689
31527
Verrucomicrobiota
GGA
Ser
>WENV170083571
CEAA01037643
286765
Verrucomicrobiota
GGG
Pro
>WENV170083857
CEAA01048112
470563
Verrucomicrobiota
GGC
Ala
>WENV170083009
CEAA01017163
88820
Verrucomicrobiota
TGA
Ser
>WENV170082791
CEAA01008986
468989
Verrucomicrobiota
CTT
Lys
>WENV170082790
CEAA01008986
468989
Verrucomicrobiota
CTT
Lys
>WENV170082789
CEAA01008986
468989
Verrucomicrobiota
CTT
Lys
>WENV170082894
CEAA01012378
242669
Verrucomicrobiota
GTC
Asp
>WENV170082936
CEAA01013689
242669
Verrucomicrobiota
GTC
Asp
>WENV170083864
CEAA01048592
663166
Verrucomicrobiota
TGT
Thr
>WENV170083257
CEAA01028435
663168
Verrucomicrobiota
GTT
Asn
>WENV170082788
CEAA01008986
662761
Verrucomicrobiota
CGT
Thr
>WENV170083861
CEAA01048592
155855
Verrucomicrobiota
AAG
Leu
>WENV170083012
CEAA01017163
662758
Verrucomicrobiota
GTG
His
>WENV170083568
CEAA01037643
286784
Verrucomicrobiota
ACG
Arg
>WENV170083661
CEAA01040935
663178
Verrucomicrobiota
GAC
Val
>WENV170083441
CEAA01033212
12872
Verrucomicrobiota
CGA
Ser
>WENV170083863
CEAA01048592
470561
Verrucomicrobiota
TTC
Glu
>WENV170083011
CEAA01017163
470561
Verrucomicrobiota
TTC
Glu
>WENV170082982
CEAA01016261
469030
Verrucomicrobiota
TTT
Lys
>WENV170083013
CEAA01017163
470562
Verrucomicrobiota
CAT
Met
>WENV170082983
CEAA01016261
286752
Verrucomicrobiota
TCT
Arg
>WENV170083573
CEAA01037643
285841
Verrucomicrobiota
TGG
Pro
>WENV170083572
CEAA01037643
469466
Verrucomicrobiota
GAA
Phe
>WENV170082787
CEAA01008986
286773
Verrucomicrobiota
CGG
Pro
>WENV170083926
CEAA01050677
663161
Verrucomicrobiota
TAC
Val
>WENV170083879
CEAA01049001
286760
Verrucomicrobiota
CAT
Met
>WENV170083862
CEAA01048592
662765
Verrucomicrobiota
GCA
Cys
>WENV170083034
CEAA01018060
662614
Verrucomicrobiota
GGT
Thr
>WENV170083014
CEAA01017163
663157
Verrucomicrobiota
CAT
Met
>WENV170083283
CEAA01028785
783783
Verrucomicrobiota
CCC
Gly
>WENV170083669
CEAA01041344
663193
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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