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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170089245
CEAF01001167
284706
Bacteroidetes
GTT
Asn
>WENV170089371
CEAF01005134
154983
Bacteroidetes
GTA
Tyr
>WENV170090676
CEAF01054217
154983
Bacteroidetes
GTA
Tyr
>WENV170089933
CEAF01024282
779477
Bacteroidetes
TTG
Gln
>WENV170090056
CEAF01029401
779477
Bacteroidetes
TTG
Gln
>WENV170090079
CEAF01030117
779477
Bacteroidetes
TTG
Gln
>WENV170090192
CEAF01034179
779477
Bacteroidetes
TTG
Gln
>WENV170090601
CEAF01051156
779477
Bacteroidetes
TTG
Gln
>WENV170090581
CEAF01050605
281406
Bacteroidetes
GGC
Ala
>WENV170090872
CEAF01062369
281406
Bacteroidetes
GGC
Ala
>WENV170090670
CEAF01054040
270542
Bacteroidetes
CAT
Met
>WENV170089680
CEAF01015314
113533
Bacteroidetes
CAG
Leu
>WENV170090414
CEAF01043718
113533
Bacteroidetes
CAG
Leu
>WENV170089796
CEAF01019710
779388
Bacteroidetes
CTG
Gln
>WENV170089309
CEAF01002918
451478
Bacteroidetes
TTT
Lys
>WENV170089709
CEAF01015875
451478
Bacteroidetes
TTT
Lys
>WENV170090267
CEAF01038107
458130
Bacteroidetes
TTT
Lys
>WENV170091087
CEAF01070225
458130
Bacteroidetes
TTT
Lys
>WENV170090057
CEAF01029449
653389
Bacteroidetes
GGT
Thr
>WENV170089439
CEAF01007382
658239
Bacteroidetes
CTC
Glu
>WENV170090401
CEAF01043215
87355
Bacteroidetes
TGA
Ser
>WENV170089762
CEAF01018620
779381
Bacteroidetes
CTG
Gln
>WENV170091089
CEAF01070229
30278
Bacteroidetes
GGA
Ser
>WENV170090450
CEAF01045496
112241
Bacteroidetes
CAA
Leu
>WENV170090483
CEAF01047008
218000
Bacteroidetes
CAG
Leu
>WENV170090708
CEAF01055731
218000
Bacteroidetes
CAG
Leu
>WENV170090711
CEAF01055731
218000
Bacteroidetes
CAG
Leu
>WENV170089727
CEAF01016932
270492
Bacteroidetes
GTG
His
>WENV170090261
CEAF01037518
283437
Bacteroidetes
TGT
Thr
>WENV170089984
CEAF01026373
451360
Bacteroidetes
CGT
Thr
>WENV170089953
CEAF01025323
458644
Bacteroidetes
CCC
Gly
>WENV170091070
CEAF01069653
458644
Bacteroidetes
CCC
Gly
>WENV170089389
CEAF01005666
153684
Bacteroidetes
GTA
Tyr
>WENV170089595
CEAF01012904
153684
Bacteroidetes
GTA
Tyr
>WENV170089944
CEAF01024869
153684
Bacteroidetes
GTA
Tyr
>WENV170090393
CEAF01043161
153684
Bacteroidetes
GTA
Tyr
>WENV170090848
CEAF01061153
153684
Bacteroidetes
GTA
Tyr
>WENV170089336
CEAF01004046
783463
Bacteroidetes
CTG
Gln
>WENV170089725
CEAF01016850
783463
Bacteroidetes
CTG
Gln
>WENV170089426
CEAF01006926
86859
Bacteroidetes
TGA
Ser
>WENV170089764
CEAF01018628
86859
Bacteroidetes
TGA
Ser
>WENV170089948
CEAF01024907
86859
Bacteroidetes
TGA
Ser
>WENV170090258
CEAF01037489
86859
Bacteroidetes
TGA
Ser
>WENV170090328
CEAF01039756
86859
Bacteroidetes
TGA
Ser
>WENV170089545
CEAF01010699
451389
Bacteroidetes
GCC
Gly
>WENV170089547
CEAF01010699
451389
Bacteroidetes
GCC
Gly
>WENV170090191
CEAF01034095
451389
Bacteroidetes
GCC
Gly
>WENV170090413
CEAF01043718
451389
Bacteroidetes
GCC
Gly
>WENV170090841
CEAF01060705
451389
Bacteroidetes
GCC
Gly
>WENV170091060
CEAF01069115
451389
Bacteroidetes
GCC
Gly
>WENV170089472
CEAF01008476
179905
Bacteroidetes
TAG
Leu
>WENV170089646
CEAF01014705
660446
Bacteroidetes
CCT
Arg
>WENV170089236
CEAF01000604
270418
Bacteroidetes
GGC
Ala
>WENV170090444
CEAF01045019
270418
Bacteroidetes
GGC
Ala
>WENV170089795
CEAF01019710
277204
Bacteroidetes
GTC
Asp
>WENV170089400
CEAF01005757
779393
Bacteroidetes
TTG
Gln
>WENV170089544
CEAF01010698
779393
Bacteroidetes
TTG
Gln
>WENV170090732
CEAF01057273
782347
Bacteroidetes
CTG
Gln
>WENV170091088
CEAF01070229
782347
Bacteroidetes
CTG
Gln
>WENV170090412
CEAF01043717
270491
Bacteroidetes
GGC
Ala
>WENV170090689
CEAF01054876
270491
Bacteroidetes
GGC
Ala
>WENV170089625
CEAF01014069
241460
Bacteroidetes
TAC
Val
>WENV170089626
CEAF01014069
241460
Bacteroidetes
TAC
Val
>WENV170089627
CEAF01014069
241460
Bacteroidetes
TAC
Val
>WENV170090140
CEAF01031950
241460
Bacteroidetes
TAC
Val
>WENV170090141
CEAF01031950
241460
Bacteroidetes
TAC
Val
>WENV170090869
CEAF01062352
241460
Bacteroidetes
TAC
Val
>WENV170090870
CEAF01062352
241460
Bacteroidetes
TAC
Val
>WENV170089852
CEAF01021397
451484
Bacteroidetes
CAT
Met
>WENV170090097
CEAF01031202
451484
Bacteroidetes
CAT
Met
>WENV170089678
CEAF01015314
30567
Bacteroidetes
GGA
Ser
>WENV170090478
CEAF01046593
30567
Bacteroidetes
GGA
Ser
>WENV170089307
CEAF01002918
653388
Bacteroidetes
TTC
Glu
>WENV170089308
CEAF01002918
653388
Bacteroidetes
TTC
Glu
>WENV170089374
CEAF01005134
463028
Bacteroidetes
CAT
Met
>WENV170089848
CEAF01020956
463028
Bacteroidetes
CAT
Met
>WENV170091104
CEAF01070849
463028
Bacteroidetes
CAT
Met
>WENV170089682
CEAF01015316
653774
Bacteroidetes
CAT
Met
>WENV170090253
CEAF01037487
653774
Bacteroidetes
CAT
Met
>WENV170091011
CEAF01067688
653774
Bacteroidetes
CAT
Met
>WENV170089910
CEAF01023105
153692
Bacteroidetes
GTA
Tyr
>WENV170090866
CEAF01062351
153692
Bacteroidetes
GTA
Tyr
>WENV170090942
CEAF01064991
153692
Bacteroidetes
GTA
Tyr
>WENV170089710
CEAF01015892
270851
Bacteroidetes
TCT
Arg
>WENV170090357
CEAF01040956
270851
Bacteroidetes
TCT
Arg
>WENV170090480
CEAF01046626
270851
Bacteroidetes
TCT
Arg
>WENV170089261
CEAF01001796
30277
Bacteroidetes
GGA
Ser
>WENV170089859
CEAF01021546
30277
Bacteroidetes
GGA
Ser
>WENV170090624
CEAF01051826
653377
Bacteroidetes
CTC
Glu
>WENV170089478
CEAF01009018
653350
Bacteroidetes
GCA
Cys
>WENV170089655
CEAF01014714
653350
Bacteroidetes
GCA
Cys
>WENV170090331
CEAF01039824
653350
Bacteroidetes
GCA
Cys
>WENV170091057
CEAF01069084
653350
Bacteroidetes
GCA
Cys
>WENV170091071
CEAF01069684
653350
Bacteroidetes
GCA
Cys
>WENV170091078
CEAF01070215
653350
Bacteroidetes
GCA
Cys
>WENV170090944
CEAF01064991
270497
Bacteroidetes
GTG
His
>WENV170090945
CEAF01064991
270497
Bacteroidetes
GTG
His
>WENV170089264
CEAF01002362
653342
Bacteroidetes
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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