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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170090430
CEAF01044454
270446
Deltaproteobacteria
GGG
Pro
>WENV170090582
CEAF01050966
270446
Deltaproteobacteria
GGG
Pro
>WENV170090583
CEAF01050966
270446
Deltaproteobacteria
GGG
Pro
>WENV170091110
CEAF01071302
156076
Deltaproteobacteria
GTA
Tyr
>WENV170089786
CEAF01019239
285948
Deltaproteobacteria
GTC
Asp
>WENV170091075
CEAF01070200
285948
Deltaproteobacteria
GTC
Asp
>WENV170091076
CEAF01070200
285948
Deltaproteobacteria
GTC
Asp
>WENV170091111
CEAF01071302
474979
Deltaproteobacteria
TCC
Gly
>WENV170089230
CEAF01000020
471975
Deltaproteobacteria
GAA
Phe
>WENV170089263
CEAF01001902
288741
Deltaproteobacteria
TTC
Glu
>WENV170090445
CEAF01045170
288741
Deltaproteobacteria
TTC
Glu
>WENV170090455
CEAF01045515
288741
Deltaproteobacteria
TTC
Glu
>WENV170090422
CEAF01044196
284595
Deltaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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