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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170089566
CEAF01011728
457039
Firmicutes
GAA
Phe
>WENV170090761
CEAF01058359
275613
Firmicutes
GTG
His
>WENV170089761
CEAF01018610
275710
Firmicutes
CCG
Arg
>WENV170089834
CEAF01020856
275710
Firmicutes
CCG
Arg
>WENV170090092
CEAF01031083
275710
Firmicutes
CCG
Arg
>WENV170090058
CEAF01029458
270416
Firmicutes
CAC
Val
>WENV170090209
CEAF01035102
270416
Firmicutes
CAC
Val
>WENV170089244
CEAF01001126
653346
Firmicutes
TTC
Glu
>WENV170090039
CEAF01028439
270436
Firmicutes
GTG
His
>WENV170090197
CEAF01034630
270436
Firmicutes
GTG
His
>WENV170089793
CEAF01019700
86860
Firmicutes
TGA
Ser
>WENV170090180
CEAF01033999
86860
Firmicutes
TGA
Ser
>WENV170090837
CEAF01060595
86860
Firmicutes
TGA
Ser
>WENV170090181
CEAF01033999
8223
Firmicutes
GCT
Ser
>WENV170089348
CEAF01004225
779387
Firmicutes
TTG
Gln
>WENV170089851
CEAF01021384
779387
Firmicutes
TTG
Gln
>WENV170090657
CEAF01053808
779387
Firmicutes
TTG
Gln
>WENV170090658
CEAF01053898
779387
Firmicutes
TTG
Gln
>WENV170090749
CEAF01058345
284731
Firmicutes
GTC
Asp
>WENV170090752
CEAF01058345
284731
Firmicutes
GTC
Asp
>WENV170090070
CEAF01030029
465106
Firmicutes
TGT
Thr
>WENV170090940
CEAF01064990
465106
Firmicutes
TGT
Thr
>WENV170089414
CEAF01006232
285831
Firmicutes
GTC
Asp
>WENV170089460
CEAF01008351
285831
Firmicutes
GTC
Asp
>WENV170089493
CEAF01009043
285831
Firmicutes
GTC
Asp
>WENV170090618
CEAF01051738
285831
Firmicutes
GTC
Asp
>WENV170089235
CEAF01000572
270426
Firmicutes
GAT
Ile
>WENV170090485
CEAF01047100
270426
Firmicutes
GAT
Ile
>WENV170091096
CEAF01070779
270426
Firmicutes
GAT
Ile
>WENV170089355
CEAF01004565
451367
Firmicutes
TAC
Val
>WENV170089413
CEAF01006232
451367
Firmicutes
TAC
Val
>WENV170090227
CEAF01036254
451367
Firmicutes
TAC
Val
>WENV170090503
CEAF01047826
451367
Firmicutes
TAC
Val
>WENV170090842
CEAF01060707
451367
Firmicutes
TAC
Val
>WENV170090428
CEAF01044332
456796
Firmicutes
GGC
Ala
>WENV170090152
CEAF01032395
653367
Firmicutes
CTC
Glu
>WENV170090362
CEAF01041920
270438
Firmicutes
TCT
Arg
>WENV170090659
CEAF01053959
451352
Firmicutes
GGT
Thr
>WENV170089686
CEAF01015318
275959
Firmicutes
CAT
Met
>WENV170090511
CEAF01048275
275959
Firmicutes
CAT
Met
>WENV170089563
CEAF01011677
451398
Firmicutes
TGC
Ala
>WENV170089532
CEAF01010142
465093
Firmicutes
GCC
Gly
>WENV170090128
CEAF01031225
275792
Firmicutes
TCT
Arg
>WENV170090196
CEAF01034630
275792
Firmicutes
TCT
Arg
>WENV170090760
CEAF01058359
275792
Firmicutes
TCT
Arg
>WENV170090247
CEAF01037397
284661
Firmicutes
CAT
Met
>WENV170090661
CEAF01053962
284661
Firmicutes
CAT
Met
>WENV170089303
CEAF01002857
287917
Firmicutes
GAT
Ile
>WENV170089763
CEAF01018622
661891
Firmicutes
GCC
Gly
>WENV170090750
CEAF01058345
661891
Firmicutes
GCC
Gly
>WENV170090754
CEAF01058345
661891
Firmicutes
GCC
Gly
>WENV170090391
CEAF01043085
779385
Firmicutes
CTG
Gln
>WENV170090447
CEAF01045352
779385
Firmicutes
CTG
Gln
>WENV170090933
CEAF01064689
779385
Firmicutes
CTG
Gln
>WENV170089849
CEAF01021333
451357
Firmicutes
CTT
Lys
>WENV170089658
CEAF01014726
274813
Firmicutes
ACG
Arg
>WENV170091098
CEAF01070782
20504
Firmicutes
GGA
Ser
>WENV170089535
CEAF01010159
73357
Firmicutes
TGA
Ser
>WENV170090399
CEAF01043180
73357
Firmicutes
TGA
Ser
>WENV170089958
CEAF01025776
467075
Firmicutes
TGC
Ala
>WENV170090751
CEAF01058345
466856
Firmicutes
CCA
Trp
>WENV170089401
CEAF01006201
30533
Firmicutes
GCT
Ser
>WENV170089519
CEAF01009990
653369
Firmicutes
CTC
Glu
>WENV170091123
CEAF01071993
653369
Firmicutes
CTC
Glu
>WENV170091135
CEAF01072099
458649
Firmicutes
GCC
Gly
>WENV170091136
CEAF01072099
458649
Firmicutes
GCC
Gly
>WENV170089265
CEAF01002366
653347
Firmicutes
TGT
Thr
>WENV170089321
CEAF01003463
780500
Firmicutes
CCA
Trp
>WENV170090249
CEAF01037480
780500
Firmicutes
CCA
Trp
>WENV170090951
CEAF01065478
284784
Firmicutes
GAT
Ile
>WENV170090015
CEAF01027561
285826
Firmicutes
CAT
Met
>WENV170089854
CEAF01021398
113007
Firmicutes
CAG
Leu
>WENV170090585
CEAF01051147
113007
Firmicutes
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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