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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170092121
CEAG01035948
154983
Bacteroidota
GTA
Tyr
>WENV170092240
CEAG01040078
154983
Bacteroidota
GTA
Tyr
>WENV170091649
CEAG01018783
86857
Bacteroidota
TAA
Leu
>WENV170092006
CEAG01032171
86857
Bacteroidota
TAA
Leu
>WENV170092155
CEAG01037218
86857
Bacteroidota
TAA
Leu
>WENV170091289
CEAG01006182
470605
Bacteroidota
GAA
Phe
>WENV170092370
CEAG01044546
470605
Bacteroidota
GAA
Phe
>WENV170091859
CEAG01026896
779477
Bacteroidota
TTG
Gln
>WENV170091891
CEAG01027982
779477
Bacteroidota
TTG
Gln
>WENV170091904
CEAG01028859
779477
Bacteroidota
TTG
Gln
>WENV170091182
CEAG01001864
281406
Bacteroidota
GGC
Ala
>WENV170091347
CEAG01007720
281406
Bacteroidota
GGC
Ala
>WENV170091564
CEAG01015588
281406
Bacteroidota
GGC
Ala
>WENV170092759
CEAG01057931
270542
Bacteroidota
CAT
Met
>WENV170092181
CEAG01038711
270542
Bacteroidota
CAT
Met
>WENV170092198
CEAG01039497
270412
Bacteroidota
GTT
Asn
>WENV170092197
CEAG01039497
270412
Bacteroidota
GTT
Asn
>WENV170092196
CEAG01039497
270412
Bacteroidota
GTT
Asn
>WENV170091320
CEAG01007173
270412
Bacteroidota
GTT
Asn
>WENV170092813
CEAG01060279
451354
Bacteroidota
TTT
Lys
>WENV170092665
CEAG01054418
451354
Bacteroidota
TTT
Lys
>WENV170092318
CEAG01043471
451354
Bacteroidota
TTT
Lys
>WENV170092168
CEAG01038234
451354
Bacteroidota
TTT
Lys
>WENV170091737
CEAG01021687
451354
Bacteroidota
TTT
Lys
>WENV170091611
CEAG01017838
451354
Bacteroidota
TTT
Lys
>WENV170091167
CEAG01001391
451354
Bacteroidota
TTT
Lys
>WENV170092777
CEAG01058757
113533
Bacteroidota
CAG
Leu
>WENV170092787
CEAG01059222
281835
Bacteroidota
TGT
Thr
>WENV170092307
CEAG01043028
779388
Bacteroidota
CTG
Gln
>WENV170092306
CEAG01043028
779388
Bacteroidota
CTG
Gln
>WENV170092250
CEAG01040553
451478
Bacteroidota
TTT
Lys
>WENV170092697
CEAG01055896
458130
Bacteroidota
TTT
Lys
>WENV170092675
CEAG01054488
458130
Bacteroidota
TTT
Lys
>WENV170091180
CEAG01001854
284758
Bacteroidota
GAT
Ile
>WENV170092377
CEAG01044898
653389
Bacteroidota
GGT
Thr
>WENV170092462
CEAG01047825
658239
Bacteroidota
CTC
Glu
>WENV170092693
CEAG01055599
87355
Bacteroidota
TGA
Ser
>WENV170092465
CEAG01047838
87355
Bacteroidota
TGA
Ser
>WENV170091803
CEAG01024882
87355
Bacteroidota
TGA
Ser
>WENV170091734
CEAG01021684
87355
Bacteroidota
TGA
Ser
>WENV170091501
CEAG01012902
87355
Bacteroidota
TGA
Ser
>WENV170091675
CEAG01019823
30278
Bacteroidota
GGA
Ser
>WENV170092621
CEAG01052972
112241
Bacteroidota
CAA
Leu
>WENV170092410
CEAG01045866
218000
Bacteroidota
CAG
Leu
>WENV170092407
CEAG01045866
218000
Bacteroidota
CAG
Leu
>WENV170092278
CEAG01042048
218000
Bacteroidota
CAG
Leu
>WENV170091473
CEAG01011840
270492
Bacteroidota
GTG
His
>WENV170092375
CEAG01044898
283437
Bacteroidota
TGT
Thr
>WENV170092289
CEAG01042528
283437
Bacteroidota
TGT
Thr
>WENV170091176
CEAG01001524
283437
Bacteroidota
TGT
Thr
>WENV170091724
CEAG01021247
451360
Bacteroidota
CGT
Thr
>WENV170091179
CEAG01001797
451360
Bacteroidota
CGT
Thr
>WENV170091718
CEAG01021181
458644
Bacteroidota
CCC
Gly
>WENV170092764
CEAG01058396
153684
Bacteroidota
GTA
Tyr
>WENV170092558
CEAG01051503
153684
Bacteroidota
GTA
Tyr
>WENV170092264
CEAG01041066
153684
Bacteroidota
GTA
Tyr
>WENV170092028
CEAG01033046
153684
Bacteroidota
GTA
Tyr
>WENV170091390
CEAG01009175
153684
Bacteroidota
GTA
Tyr
>WENV170092661
CEAG01053971
783463
Bacteroidota
CTG
Gln
>WENV170092202
CEAG01039567
783463
Bacteroidota
CTG
Gln
>WENV170091852
CEAG01026763
783463
Bacteroidota
CTG
Gln
>WENV170091807
CEAG01024940
273124
Bacteroidota
GTC
Asp
>WENV170092457
CEAG01047763
273124
Bacteroidota
GTC
Asp
>WENV170092396
CEAG01045409
180313
Bacteroidota
TAG
Leu
>WENV170092796
CEAG01059294
86859
Bacteroidota
TGA
Ser
>WENV170092533
CEAG01050575
86859
Bacteroidota
TGA
Ser
>WENV170091387
CEAG01009167
86859
Bacteroidota
TGA
Ser
>WENV170091313
CEAG01006722
86859
Bacteroidota
TGA
Ser
>WENV170091213
CEAG01003324
86859
Bacteroidota
TGA
Ser
>WENV170092007
CEAG01032173
270514
Bacteroidota
GTT
Asn
>WENV170091832
CEAG01025875
270514
Bacteroidota
GTT
Asn
>WENV170091747
CEAG01022156
451389
Bacteroidota
GCC
Gly
>WENV170091504
CEAG01013275
451389
Bacteroidota
GCC
Gly
>WENV170091291
CEAG01006187
179905
Bacteroidota
TAG
Leu
>WENV170092157
CEAG01037382
660446
Bacteroidota
CCT
Arg
>WENV170092761
CEAG01058020
270418
Bacteroidota
GGC
Ala
>WENV170092435
CEAG01046826
270418
Bacteroidota
GGC
Ala
>WENV170091148
CEAG01000477
270418
Bacteroidota
GGC
Ala
>WENV170092000
CEAG01032100
451431
Bacteroidota
CCA
Trp
>WENV170092810
CEAG01059809
240600
Bacteroidota
GGG
Pro
>WENV170092609
CEAG01052492
240600
Bacteroidota
GGG
Pro
>WENV170092013
CEAG01032551
240600
Bacteroidota
GGG
Pro
>WENV170092717
CEAG01056896
779393
Bacteroidota
TTG
Gln
>WENV170092507
CEAG01050121
779393
Bacteroidota
TTG
Gln
>WENV170092222
CEAG01039579
779393
Bacteroidota
TTG
Gln
>WENV170091892
CEAG01028138
779393
Bacteroidota
TTG
Gln
>WENV170091703
CEAG01020731
779393
Bacteroidota
TTG
Gln
>WENV170091693
CEAG01020240
779393
Bacteroidota
TTG
Gln
>WENV170091245
CEAG01004317
779393
Bacteroidota
TTG
Gln
>WENV170091315
CEAG01006729
279189
Bacteroidota
GTT
Asn
>WENV170091314
CEAG01006729
279189
Bacteroidota
GTT
Asn
>WENV170092183
CEAG01038737
270494
Bacteroidota
CGG
Pro
>WENV170091674
CEAG01019823
782347
Bacteroidota
CTG
Gln
>WENV170092395
CEAG01045402
270471
Bacteroidota
GGC
Ala
>WENV170092140
CEAG01036618
270491
Bacteroidota
GGC
Ala
>WENV170092104
CEAG01035048
241460
Bacteroidota
TAC
Val
>WENV170092103
CEAG01035048
241460
Bacteroidota
TAC
Val
>WENV170092102
CEAG01035048
241460
Bacteroidota
TAC
Val
>WENV170092473
CEAG01048453
451484
Bacteroidota
CAT
Met
>WENV170091866
CEAG01027258
451484
Bacteroidota
CAT
Met
>WENV170091557
CEAG01015580
653343
Bacteroidota
CCT
Arg
>WENV170091551
CEAG01015412
653343
Bacteroidota
CCT
Arg
>WENV170091994
CEAG01031703
30567
Bacteroidota
GGA
Ser
>WENV170091258
CEAG01004684
653388
Bacteroidota
TTC
Glu
>WENV170091257
CEAG01004684
653388
Bacteroidota
TTC
Glu
>WENV170092243
CEAG01040078
463028
Bacteroidota
CAT
Met
>WENV170092353
CEAG01043856
463028
Bacteroidota
CAT
Met
>WENV170092722
CEAG01056912
463028
Bacteroidota
CAT
Met
>WENV170091848
CEAG01026635
653774
Bacteroidota
CAT
Met
>WENV170091972
CEAG01031151
653774
Bacteroidota
CAT
Met
>WENV170091331
CEAG01007224
153692
Bacteroidota
GTA
Tyr
>WENV170092822
CEAG01060288
270851
Bacteroidota
TCT
Arg
>WENV170092708
CEAG01056403
30277
Bacteroidota
GGA
Ser
>WENV170092172
CEAG01038255
467914
Bacteroidota
GCC
Gly
>WENV170091193
CEAG01002499
467914
Bacteroidota
GCC
Gly
>WENV170091192
CEAG01002499
467914
Bacteroidota
GCC
Gly
>WENV170092579
CEAG01051979
653350
Bacteroidota
GCA
Cys
>WENV170092123
CEAG01035957
653350
Bacteroidota
GCA
Cys
>WENV170092025
CEAG01033040
653350
Bacteroidota
GCA
Cys
>WENV170091741
CEAG01021746
653350
Bacteroidota
GCA
Cys
>WENV170091377
CEAG01008679
653350
Bacteroidota
GCA
Cys
>WENV170091221
CEAG01003762
653350
Bacteroidota
GCA
Cys
>WENV170092184
CEAG01038737
451452
Bacteroidota
CCA
Trp
>WENV170091175
CEAG01001502
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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