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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112557
CEGF01003276
273854
Gammaproteobacteria
CAT
Met
>WENV170112558
CEGF01003293
273854
Gammaproteobacteria
CAT
Met
>WENV170112593
CEGF01005580
273854
Gammaproteobacteria
CAT
Met
>WENV170112594
CEGF01005581
273854
Gammaproteobacteria
CAT
Met
>WENV170112576
CEGF01004167
779604
Gammaproteobacteria
GCA
Cys
>WENV170112688
CEGF01014569
454971
Gammaproteobacteria
TTT
Lys
>WENV170112451
CEGF01000143
455342
Gammaproteobacteria
TTC
Glu
>WENV170112462
CEGF01000360
455342
Gammaproteobacteria
TTC
Glu
>WENV170112493
CEGF01001358
273856
Gammaproteobacteria
GAC
Val
>WENV170112655
CEGF01009207
273856
Gammaproteobacteria
GAC
Val
>WENV170112677
CEGF01011775
273856
Gammaproteobacteria
GAC
Val
>WENV170112572
CEGF01004122
112813
Gammaproteobacteria
CAG
Leu
>WENV170112694
CEGF01015424
780242
Gammaproteobacteria
GCA
Cys
>WENV170112597
CEGF01005582
655198
Gammaproteobacteria
TTG
Gln
>WENV170112598
CEGF01005582
655198
Gammaproteobacteria
TTG
Gln
>WENV170112691
CEGF01014996
451784
Gammaproteobacteria
GAA
Phe
>WENV170112615
CEGF01007179
12379
Gammaproteobacteria
GCT
Ser
>WENV170112660
CEGF01009926
12379
Gammaproteobacteria
GCT
Ser
>WENV170112690
CEGF01014920
452416
Gammaproteobacteria
TTT
Lys
>WENV170112692
CEGF01015028
273847
Gammaproteobacteria
CCT
Arg
>WENV170112681
CEGF01012509
273847
Gammaproteobacteria
CCT
Arg
>WENV170112680
CEGF01012000
273847
Gammaproteobacteria
CCT
Arg
>WENV170112499
CEGF01001682
273847
Gammaproteobacteria
CCT
Arg
>WENV170112512
CEGF01002035
276185
Gammaproteobacteria
TGG
Pro
>WENV170112623
CEGF01007485
180499
Gammaproteobacteria
GTA
Tyr
>WENV170112625
CEGF01007486
180499
Gammaproteobacteria
GTA
Tyr
>WENV170112465
CEGF01000513
273853
Gammaproteobacteria
CAT
Met
>WENV170112504
CEGF01001979
273853
Gammaproteobacteria
CAT
Met
>WENV170112619
CEGF01007224
273853
Gammaproteobacteria
CAT
Met
>WENV170112599
CEGF01005582
112815
Gammaproteobacteria
CAG
Leu
>WENV170112650
CEGF01009098
114536
Gammaproteobacteria
CAA
Leu
>WENV170112616
CEGF01007179
274209
Gammaproteobacteria
ACG
Arg
>WENV170112617
CEGF01007179
274209
Gammaproteobacteria
ACG
Arg
>WENV170112661
CEGF01009926
274209
Gammaproteobacteria
ACG
Arg
>WENV170112662
CEGF01009926
274209
Gammaproteobacteria
ACG
Arg
>WENV170112578
CEGF01004307
655197
Gammaproteobacteria
TTG
Gln
>WENV170112532
CEGF01002615
655197
Gammaproteobacteria
TTG
Gln
>WENV170112534
CEGF01002627
655197
Gammaproteobacteria
TTG
Gln
>WENV170112656
CEGF01009734
46215
Gammaproteobacteria
GCT
Ser
>WENV170112575
CEGF01004167
452412
Gammaproteobacteria
GCC
Gly
>WENV170112605
CEGF01006038
452412
Gammaproteobacteria
GCC
Gly
>WENV170112589
CEGF01005282
218101
Gammaproteobacteria
GTA
Tyr
>WENV170112689
CEGF01014612
218101
Gammaproteobacteria
GTA
Tyr
>WENV170112644
CEGF01008683
30520
Gammaproteobacteria
TGA
Ser
>WENV170112563
CEGF01003581
180498
Gammaproteobacteria
TAG
Leu
>WENV170112635
CEGF01008118
180498
Gammaproteobacteria
TAG
Leu
>WENV170112533
CEGF01002627
454424
Gammaproteobacteria
GAA
Phe
>WENV170112682
CEGF01012588
454424
Gammaproteobacteria
GAA
Phe
>WENV170112614
CEGF01006660
273859
Gammaproteobacteria
CGG
Pro
>WENV170112560
CEGF01003495
780101
Gammaproteobacteria
TCC
Gly
>WENV170112587
CEGF01005245
271200
Gammaproteobacteria
CAT
Met
>WENV170112664
CEGF01010476
454968
Gammaproteobacteria
TAC
Val
>WENV170112490
CEGF01001241
454968
Gammaproteobacteria
TAC
Val
>WENV170112648
CEGF01008923
454968
Gammaproteobacteria
TAC
Val
>WENV170112667
CEGF01010476
454968
Gammaproteobacteria
TAC
Val
>WENV170112481
CEGF01000981
456709
Gammaproteobacteria
TGC
Ala
>WENV170112609
CEGF01006051
780241
Gammaproteobacteria
GCA
Cys
>WENV170112652
CEGF01009125
780241
Gammaproteobacteria
GCA
Cys
>WENV170112630
CEGF01007922
454969
Gammaproteobacteria
GTT
Asn
>WENV170112581
CEGF01004642
454969
Gammaproteobacteria
GTT
Asn
>WENV170112580
CEGF01004642
454969
Gammaproteobacteria
GTT
Asn
>WENV170112579
CEGF01004642
454969
Gammaproteobacteria
GTT
Asn
>WENV170112651
CEGF01009125
655385
Gammaproteobacteria
GCC
Gly
>WENV170112608
CEGF01006051
655385
Gammaproteobacteria
GCC
Gly
>WENV170112498
CEGF01001640
655385
Gammaproteobacteria
GCC
Gly
>WENV170112497
CEGF01001620
655385
Gammaproteobacteria
GCC
Gly
>WENV170112489
CEGF01001241
273852
Gammaproteobacteria
GTC
Asp
>WENV170112491
CEGF01001241
273852
Gammaproteobacteria
GTC
Asp
>WENV170112647
CEGF01008923
273852
Gammaproteobacteria
GTC
Asp
>WENV170112649
CEGF01008923
273852
Gammaproteobacteria
GTC
Asp
>WENV170112665
CEGF01010476
273852
Gammaproteobacteria
GTC
Asp
>WENV170112666
CEGF01010476
273852
Gammaproteobacteria
GTC
Asp
>WENV170112668
CEGF01010476
273852
Gammaproteobacteria
GTC
Asp
>WENV170112596
CEGF01005582
180500
Gammaproteobacteria
TAG
Leu
>WENV170112570
CEGF01004122
112884
Gammaproteobacteria
CAG
Leu
>WENV170112636
CEGF01008173
452414
Gammaproteobacteria
TTC
Glu
>WENV170112524
CEGF01002341
112814
Gammaproteobacteria
GAG
Leu
>WENV170112678
CEGF01011851
112814
Gammaproteobacteria
GAG
Leu
>WENV170112561
CEGF01003495
655194
Gammaproteobacteria
GGT
Thr
>WENV170112541
CEGF01002695
274204
Gammaproteobacteria
GGG
Pro
>WENV170112536
CEGF01002643
454964
Gammaproteobacteria
TTC
Glu
>WENV170112555
CEGF01003143
454964
Gammaproteobacteria
TTC
Glu
>WENV170112537
CEGF01002673
452407
Gammaproteobacteria
GAA
Phe
>WENV170112525
CEGF01002341
271253
Gammaproteobacteria
CAT
Met
>WENV170112556
CEGF01003204
271253
Gammaproteobacteria
CAT
Met
>WENV170112582
CEGF01004681
271253
Gammaproteobacteria
CAT
Met
>WENV170112679
CEGF01011851
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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