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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170115862
CENG01056338
457453
Gammaproteobacteria
TTT
Lys
>WENV170115800
CENG01049855
274150
Gammaproteobacteria
CAT
Met
>WENV170115384
CENG01016334
656944
Gammaproteobacteria
CCT
Arg
>WENV170115600
CENG01032817
272023
Gammaproteobacteria
GAT
Ile
>WENV170116500
CENG01125859
276974
Gammaproteobacteria
GGG
Pro
>WENV170115338
CENG01013283
30865
Gammaproteobacteria
GCT
Ser
>WENV170115340
CENG01013283
276971
Gammaproteobacteria
ACG
Arg
>WENV170115339
CENG01013283
276971
Gammaproteobacteria
ACG
Arg
>WENV170115569
CENG01028788
276973
Gammaproteobacteria
GAC
Val
>WENV170116242
CENG01101772
460378
Gammaproteobacteria
TAC
Val
>WENV170115810
CENG01050785
113485
Gammaproteobacteria
CAA
Leu
>WENV170116217
CENG01099654
452881
Gammaproteobacteria
TGT
Thr
>WENV170116316
CENG01110631
459319
Gammaproteobacteria
GAA
Phe
>WENV170115886
CENG01058319
454397
Gammaproteobacteria
TGT
Thr
>WENV170115821
CENG01051925
30792
Gammaproteobacteria
GGA
Ser
>WENV170115471
CENG01022064
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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