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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170116737
CENH01006382
275457
Gammaproteobacteria
ACG
Arg
>WENV170116738
CENH01006382
275457
Gammaproteobacteria
ACG
Arg
>WENV170116786
CENH01018625
656944
Gammaproteobacteria
CCT
Arg
>WENV170116822
CENH01026548
456706
Gammaproteobacteria
TGT
Thr
>WENV170116702
CENH01001029
276974
Gammaproteobacteria
GGG
Pro
>WENV170116739
CENH01006392
458351
Gammaproteobacteria
TTG
Gln
>WENV170116733
CENH01006150
30865
Gammaproteobacteria
GCT
Ser
>WENV170116734
CENH01006150
276971
Gammaproteobacteria
ACG
Arg
>WENV170116837
CENH01028149
780642
Gammaproteobacteria
GCA
Cys
>WENV170116817
CENH01025764
452332
Gammaproteobacteria
GTG
His
>WENV170116818
CENH01025764
180005
Gammaproteobacteria
TAG
Leu
>WENV170116696
CENH01000252
278982
Gammaproteobacteria
CCG
Arg
>WENV170116771
CENH01012805
781121
Gammaproteobacteria
GCA
Cys
>WENV170116809
CENH01024816
273754
Gammaproteobacteria
GTT
Asn
>WENV170116851
CENH01031981
273754
Gammaproteobacteria
GTT
Asn
>WENV170116698
CENH01000270
271613
Gammaproteobacteria
GTC
Asp
>WENV170116802
CENH01023132
276972
Gammaproteobacteria
CCA
Trp
>WENV170116741
CENH01007004
276972
Gammaproteobacteria
CCA
Trp
>WENV170116690
CENH01000043
276972
Gammaproteobacteria
CCA
Trp
>WENV170116697
CENH01000257
276970
Gammaproteobacteria
CCG
Arg
>WENV170116725
CENH01004929
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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