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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121128
CENL01053196
486408
Gammaproteobacteria
GTT
Asn
>WENV170120791
CENL01004495
271464
Gammaproteobacteria
TGG
Pro
>WENV170120826
CENL01006947
274150
Gammaproteobacteria
CAT
Met
>WENV170120799
CENL01005026
270982
Gammaproteobacteria
GAT
Ile
>WENV170120823
CENL01006867
272023
Gammaproteobacteria
GAT
Ile
>WENV170120800
CENL01005026
474720
Gammaproteobacteria
TGC
Ala
>WENV170120745
CENL01000330
451982
Gammaproteobacteria
GGC
Ala
>WENV170120755
CENL01001228
273719
Gammaproteobacteria
CAT
Met
>WENV170121234
CENL01075440
452881
Gammaproteobacteria
TGT
Thr
>WENV170121207
CENL01062484
454397
Gammaproteobacteria
TGT
Thr
>WENV170121046
CENL01041088
275288
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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