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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121529
CENM01039326
112989
Gammaproteobacteria
TAA
Leu
>WENV170121521
CENM01038812
653594
Gammaproteobacteria
CCT
Arg
>WENV170121544
CENM01039698
452598
Gammaproteobacteria
GTG
His
>WENV170121403
CENM01000993
273856
Gammaproteobacteria
GAC
Val
>WENV170121398
CENM01000469
451916
Gammaproteobacteria
TTC
Glu
>WENV170121482
CENM01032250
452605
Gammaproteobacteria
GGC
Ala
>WENV170121470
CENM01029429
779641
Gammaproteobacteria
TCC
Gly
>WENV170121530
CENM01039359
45751
Gammaproteobacteria
GGA
Ser
>WENV170121546
CENM01039715
271617
Gammaproteobacteria
GGG
Pro
>WENV170121537
CENM01039585
451982
Gammaproteobacteria
GGC
Ala
>WENV170121542
CENM01039698
271611
Gammaproteobacteria
TGG
Pro
>WENV170121552
CENM01039753
656404
Gammaproteobacteria
TTG
Gln
>WENV170121401
CENM01000592
655197
Gammaproteobacteria
TTG
Gln
>WENV170121459
CENM01026392
218101
Gammaproteobacteria
GTA
Tyr
>WENV170121492
CENM01035029
179999
Gammaproteobacteria
CAA
Leu
>WENV170121500
CENM01036565
45712
Gammaproteobacteria
GGA
Ser
>WENV170121528
CENM01039272
271616
Gammaproteobacteria
CAT
Met
>WENV170121503
CENM01036906
86900
Gammaproteobacteria
TGA
Ser
>WENV170121547
CENM01039720
452603
Gammaproteobacteria
CCA
Trp
>WENV170121430
CENM01012400
270905
Gammaproteobacteria
CCG
Arg
>WENV170121462
CENM01026866
779494
Gammaproteobacteria
GCA
Cys
>WENV170121471
CENM01029429
655603
Gammaproteobacteria
GGT
Thr
>WENV170121465
CENM01027416
112363
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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