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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170131374
CENS01053893
273797
Alphaproteobacteria
GGG
Pro
>WENV170131438
CENS01063750
452884
Alphaproteobacteria
CCA
Trp
>WENV170131392
CENS01056437
455289
Alphaproteobacteria
TTT
Lys
>WENV170131037
CENS01005227
780331
Alphaproteobacteria
TCC
Gly
>WENV170131592
CENS01102614
218119
Alphaproteobacteria
>WENV170131605
CENS01107170
451742
Alphaproteobacteria
GGC
Ala
>WENV170131570
CENS01088740
19999
Alphaproteobacteria
GCT
Ser
>WENV170130981
CENS01000022
655363
Alphaproteobacteria
GGT
Thr
>WENV170131435
CENS01062328
455172
Alphaproteobacteria
GGC
Ala
>WENV170131060
CENS01006933
273450
Alphaproteobacteria
TCT
Arg
>WENV170131426
CENS01061208
274138
Alphaproteobacteria
CAT
Met
>WENV170131393
CENS01056574
655361
Alphaproteobacteria
GCC
Gly
>WENV170131364
CENS01052281
274141
Alphaproteobacteria
CCT
Arg
>WENV170131381
CENS01054712
112839
Alphaproteobacteria
CAG
Leu
>WENV170131198
CENS01023539
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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