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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170132579
CENT01085865
240997
Alphaproteobacteria
GGG
Pro
>WENV170132284
CENT01055140
452884
Alphaproteobacteria
CCA
Trp
>WENV170132310
CENT01057580
113518
Alphaproteobacteria
CAG
Leu
>WENV170132831
CENT01141097
654953
Alphaproteobacteria
GGT
Thr
>WENV170132704
CENT01096977
218119
Alphaproteobacteria
>WENV170132107
CENT01037426
277700
Alphaproteobacteria
GTG
His
>WENV170132609
CENT01089353
277700
Alphaproteobacteria
GTG
His
>WENV170132653
CENT01093480
452894
Alphaproteobacteria
CCA
Trp
>WENV170131986
CENT01024440
653532
Alphaproteobacteria
GTT
Asn
>WENV170132244
CENT01051099
658305
Alphaproteobacteria
GAC
Val
>WENV170132393
CENT01066223
180720
Alphaproteobacteria
TAG
Leu
>WENV170132114
CENT01038707
272979
Alphaproteobacteria
GAT
Ile
>WENV170132652
CENT01093449
273803
Alphaproteobacteria
CCT
Arg
>WENV170131705
CENT01001412
655271
Alphaproteobacteria
GGT
Thr
>WENV170132772
CENT01118661
454489
Alphaproteobacteria
CGC
Ala
>WENV170132570
CENT01085156
46439
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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