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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170176743
CEOS01118264
275204
Alphaproteobacteria
ACG
Arg
>WENV170176313
CEOS01062254
218595
Alphaproteobacteria
CAA
Leu
>WENV170176372
CEOS01069884
112839
Alphaproteobacteria
CAG
Leu
>WENV170175833
CEOS01012398
281026
Alphaproteobacteria
CAT
Met
>WENV170175959
CEOS01022825
281026
Alphaproteobacteria
CAT
Met
>WENV170176990
CEOS01144812
274224
Alphaproteobacteria
CAT
Met
>WENV170176669
CEOS01108268
274224
Alphaproteobacteria
CAT
Met
>WENV170176458
CEOS01079697
274224
Alphaproteobacteria
CAT
Met
>WENV170175820
CEOS01010280
454512
Alphaproteobacteria
CCA
Trp
>WENV170175951
CEOS01022017
454512
Alphaproteobacteria
CCA
Trp
>WENV170176054
CEOS01033585
454512
Alphaproteobacteria
CCA
Trp
>WENV170176524
CEOS01087985
454512
Alphaproteobacteria
CCA
Trp
>WENV170176708
CEOS01114943
451756
Alphaproteobacteria
CCA
Trp
>WENV170176317
CEOS01062552
273447
Alphaproteobacteria
CCT
Arg
>WENV170175739
CEOS01002533
281027
Alphaproteobacteria
CCT
Arg
>WENV170176124
CEOS01042059
281027
Alphaproteobacteria
CCT
Arg
>WENV170176795
CEOS01123988
47093
Alphaproteobacteria
CGA
Ser
>WENV170177011
CEOS01145884
47093
Alphaproteobacteria
CGA
Ser
>WENV170176348
CEOS01066552
457159
Alphaproteobacteria
CGC
Ala
>WENV170176923
CEOS01139314
455360
Alphaproteobacteria
CGC
Ala
>WENV170176326
CEOS01063550
455360
Alphaproteobacteria
CGC
Ala
>WENV170175725
CEOS01001490
455360
Alphaproteobacteria
CGC
Ala
>WENV170176179
CEOS01049034
273448
Alphaproteobacteria
CGG
Pro
>WENV170176085
CEOS01036616
270798
Alphaproteobacteria
CGG
Pro
>WENV170176786
CEOS01123036
454180
Alphaproteobacteria
CGT
Thr
>WENV170176603
CEOS01098843
454056
Alphaproteobacteria
CGT
Thr
>WENV170176662
CEOS01107413
654791
Alphaproteobacteria
CTC
Glu
>WENV170176106
CEOS01039383
780346
Alphaproteobacteria
CTG
Gln
>WENV170176357
CEOS01067716
780346
Alphaproteobacteria
CTG
Gln
>WENV170176972
CEOS01143178
780346
Alphaproteobacteria
CTG
Gln
>WENV170175788
CEOS01007949
452629
Alphaproteobacteria
GAA
Phe
>WENV170175937
CEOS01020498
655270
Alphaproteobacteria
GAA
Phe
>WENV170176287
CEOS01057481
655392
Alphaproteobacteria
GAC
Val
>WENV170176017
CEOS01028799
656140
Alphaproteobacteria
GAC
Val
>WENV170176655
CEOS01106076
653539
Alphaproteobacteria
GAC
Val
>WENV170176207
CEOS01050833
113204
Alphaproteobacteria
GAG
Leu
>WENV170176173
CEOS01047878
112742
Alphaproteobacteria
GAG
Leu
>WENV170176171
CEOS01047878
780260
Alphaproteobacteria
GCA
Cys
>WENV170175822
CEOS01010591
780039
Alphaproteobacteria
GCA
Cys
>WENV170176165
CEOS01047175
655361
Alphaproteobacteria
GCC
Gly
>WENV170176868
CEOS01133502
19988
Alphaproteobacteria
GCT
Ser
>WENV170175868
CEOS01015804
31090
Alphaproteobacteria
GGA
Ser
>WENV170176651
CEOS01105433
456473
Alphaproteobacteria
GGC
Ala
>WENV170175783
CEOS01007547
451742
Alphaproteobacteria
GGC
Ala
>WENV170176266
CEOS01056212
451742
Alphaproteobacteria
GGC
Ala
>WENV170175850
CEOS01013658
455172
Alphaproteobacteria
GGC
Ala
>WENV170176877
CEOS01133766
281029
Alphaproteobacteria
GGG
Pro
>WENV170176775
CEOS01121840
281029
Alphaproteobacteria
GGG
Pro
>WENV170175809
CEOS01009496
655363
Alphaproteobacteria
GGT
Thr
>WENV170176333
CEOS01064438
270796
Alphaproteobacteria
GTC
Asp
>WENV170175981
CEOS01025484
273155
Alphaproteobacteria
GTG
His
>WENV170175756
CEOS01004416
452755
Alphaproteobacteria
TAC
Val
>WENV170176345
CEOS01066067
452755
Alphaproteobacteria
TAC
Val
>WENV170176170
CEOS01047878
788550
Alphaproteobacteria
TCC
Gly
>WENV170176552
CEOS01092037
780331
Alphaproteobacteria
TCC
Gly
>WENV170176349
CEOS01066841
780331
Alphaproteobacteria
TCC
Gly
>WENV170176075
CEOS01036002
282775
Alphaproteobacteria
TCT
Arg
>WENV170176573
CEOS01094293
273450
Alphaproteobacteria
TCT
Arg
>WENV170175854
CEOS01014209
45928
Alphaproteobacteria
TGA
Ser
>WENV170176887
CEOS01135332
451755
Alphaproteobacteria
TGC
Ala
>WENV170175957
CEOS01022611
490965
Alphaproteobacteria
TGC
Ala
>WENV170176707
CEOS01114610
273603
Alphaproteobacteria
TGG
Pro
>WENV170176195
CEOS01049883
457364
Alphaproteobacteria
TGT
Thr
>WENV170175724
CEOS01001490
454433
Alphaproteobacteria
TGT
Thr
>WENV170176136
CEOS01044231
454433
Alphaproteobacteria
TGT
Thr
>WENV170175752
CEOS01004330
664335
Alphaproteobacteria
TTC
Glu
>WENV170175711
CEOS01000602
655365
Alphaproteobacteria
TTC
Glu
>WENV170175712
CEOS01000602
655365
Alphaproteobacteria
TTC
Glu
>WENV170176632
CEOS01102263
655225
Alphaproteobacteria
TTG
Gln
>WENV170176531
CEOS01089466
655849
Alphaproteobacteria
TTG
Gln
>WENV170177007
CEOS01145488
454059
Alphaproteobacteria
TTT
Lys
>WENV170176689
CEOS01112454
454059
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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