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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170175795
CEOS01008361
285054
Bacteroidota
GAT
Ile
>WENV170176468
CEOS01081148
279311
Bacteroidota
GTT
Asn
>WENV170175954
CEOS01022586
653934
Bacteroidota
TTC
Glu
>WENV170175955
CEOS01022586
653934
Bacteroidota
TTC
Glu
>WENV170176660
CEOS01107198
467242
Bacteroidota
TTG
Gln
>WENV170176627
CEOS01101529
456728
Bacteroidota
CAT
Met
>WENV170176843
CEOS01129837
271717
Bacteroidota
GTC
Asp
>WENV170176219
CEOS01052232
452741
Bacteroidota
TCC
Gly
>WENV170176143
CEOS01045264
452741
Bacteroidota
TCC
Gly
>WENV170175929
CEOS01020083
285374
Bacteroidota
GTC
Asp
>WENV170175769
CEOS01005614
457615
Bacteroidota
TTT
Lys
>WENV170175930
CEOS01020083
241493
Bacteroidota
TAC
Val
>WENV170176373
CEOS01069956
272122
Bacteroidota
GTC
Asp
>WENV170175916
CEOS01018711
31447
Bacteroidota
GGA
Ser
>WENV170176611
CEOS01099642
273589
Bacteroidota
CAT
Met
>WENV170176529
CEOS01088971
452277
Bacteroidota
CAT
Met
>WENV170176959
CEOS01142145
180784
Bacteroidota
TAG
Leu
>WENV170176885
CEOS01135259
280666
Bacteroidota
GGC
Ala
>WENV170176994
CEOS01144939
453189
Bacteroidota
TTG
Gln
>WENV170176895
CEOS01136952
453189
Bacteroidota
TTG
Gln
>WENV170176672
CEOS01108697
453189
Bacteroidota
TTG
Gln
>WENV170177025
CEOS01149882
299977
Bacteroidota
CAT
Met
>WENV170176579
CEOS01095985
240682
Bacteroidota
GAC
Val
>WENV170176408
CEOS01072582
30383
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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