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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170180468
CEOW01098990
271464
Gammaproteobacteria
TGG
Pro
>WENV170180470
CEOW01098990
452415
Gammaproteobacteria
GTG
His
>WENV170181208
CEOW01241429
656944
Gammaproteobacteria
CCT
Arg
>WENV170180223
CEOW01065655
270982
Gammaproteobacteria
GAT
Ile
>WENV170180321
CEOW01079630
270982
Gammaproteobacteria
GAT
Ile
>WENV170180728
CEOW01125916
276974
Gammaproteobacteria
GGG
Pro
>WENV170179998
CEOW01040919
458351
Gammaproteobacteria
TTG
Gln
>WENV170180106
CEOW01051982
457171
Gammaproteobacteria
GTT
Asn
>WENV170180469
CEOW01098990
275462
Gammaproteobacteria
TCT
Arg
>WENV170181231
CEOW01250766
276973
Gammaproteobacteria
GAC
Val
>WENV170180482
CEOW01099770
452412
Gammaproteobacteria
GCC
Gly
>WENV170180426
CEOW01092844
452412
Gammaproteobacteria
GCC
Gly
>WENV170180420
CEOW01091998
452412
Gammaproteobacteria
GCC
Gly
>WENV170180045
CEOW01044685
452412
Gammaproteobacteria
GCC
Gly
>WENV170179885
CEOW01028480
275658
Gammaproteobacteria
TGG
Pro
>WENV170180473
CEOW01099046
781121
Gammaproteobacteria
GCA
Cys
>WENV170181160
CEOW01224198
113485
Gammaproteobacteria
CAA
Leu
>WENV170180705
CEOW01123589
112371
Gammaproteobacteria
CAA
Leu
>WENV170180940
CEOW01143761
276972
Gammaproteobacteria
CCA
Trp
>WENV170181115
CEOW01204922
454397
Gammaproteobacteria
TGT
Thr
>WENV170181081
CEOW01187883
276970
Gammaproteobacteria
CCG
Arg
>WENV170181235
CEOW01251297
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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