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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170191533
CEPD01031300
273854
Gammaproteobacteria
CAT
Met
>WENV170191364
CEPD01011623
112813
Gammaproteobacteria
CAG
Leu
>WENV170191365
CEPD01011623
112813
Gammaproteobacteria
CAG
Leu
>WENV170191458
CEPD01022028
273870
Gammaproteobacteria
ACG
Arg
>WENV170191459
CEPD01022028
273870
Gammaproteobacteria
ACG
Arg
>WENV170191327
CEPD01009025
276974
Gammaproteobacteria
GGG
Pro
>WENV170191384
CEPD01013780
276974
Gammaproteobacteria
GGG
Pro
>WENV170191471
CEPD01023616
454967
Gammaproteobacteria
TTT
Lys
>WENV170191472
CEPD01023616
454967
Gammaproteobacteria
TTT
Lys
>WENV170191394
CEPD01014441
455405
Gammaproteobacteria
GGT
Thr
>WENV170191457
CEPD01022028
12379
Gammaproteobacteria
GCT
Ser
>WENV170191772
CEPD01059803
273847
Gammaproteobacteria
CCT
Arg
>WENV170191818
CEPD01066066
273857
Gammaproteobacteria
TGG
Pro
>WENV170191266
CEPD01004262
273844
Gammaproteobacteria
CCG
Arg
>WENV170191669
CEPD01046885
276973
Gammaproteobacteria
GAC
Val
>WENV170191792
CEPD01063215
114536
Gammaproteobacteria
CAA
Leu
>WENV170191603
CEPD01038529
271287
Gammaproteobacteria
CAT
Met
>WENV170191532
CEPD01031300
655197
Gammaproteobacteria
TTG
Gln
>WENV170191253
CEPD01002933
87214
Gammaproteobacteria
GGA
Ser
>WENV170191891
CEPD01074829
218101
Gammaproteobacteria
GTA
Tyr
>WENV170191797
CEPD01063808
30520
Gammaproteobacteria
TGA
Ser
>WENV170191819
CEPD01066066
273858
Gammaproteobacteria
TCT
Arg
>WENV170191359
CEPD01011306
273859
Gammaproteobacteria
CGG
Pro
>WENV170191892
CEPD01074829
780101
Gammaproteobacteria
TCC
Gly
>WENV170191547
CEPD01032786
454969
Gammaproteobacteria
GTT
Asn
>WENV170191544
CEPD01032443
273845
Gammaproteobacteria
GGG
Pro
>WENV170191478
CEPD01024674
276972
Gammaproteobacteria
CCA
Trp
>WENV170191693
CEPD01049556
112814
Gammaproteobacteria
GAG
Leu
>WENV170191606
CEPD01039605
276970
Gammaproteobacteria
CCG
Arg
>WENV170192029
CEPD01118717
276975
Gammaproteobacteria
TGG
Pro
>WENV170191893
CEPD01074829
655194
Gammaproteobacteria
GGT
Thr
>WENV170191222
CEPD01000356
454964
Gammaproteobacteria
TTC
Glu
>WENV170191237
CEPD01001523
466186
Gammaproteobacteria
TGC
Ala
>WENV170191259
CEPD01003292
276372
Gammaproteobacteria
ACG
Arg
>WENV170191694
CEPD01049556
271253
Gammaproteobacteria
CAT
Met
>WENV170191546
CEPD01032721
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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