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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170198433
CEPL01009760
453897
Gammaproteobacteria
TAC
Val
>WENV170198804
CEPL01043627
274093
Gammaproteobacteria
GTC
Asp
>WENV170198919
CEPL01056930
275457
Gammaproteobacteria
ACG
Arg
>WENV170199103
CEPL01076109
270982
Gammaproteobacteria
GAT
Ile
>WENV170199107
CEPL01076589
271286
Gammaproteobacteria
CAT
Met
>WENV170199108
CEPL01076589
181084
Gammaproteobacteria
TAG
Leu
>WENV170199109
CEPL01076589
458352
Gammaproteobacteria
TTG
Gln
>WENV170199154
CEPL01080554
454397
Gammaproteobacteria
TGT
Thr
>WENV170199280
CEPL01095753
456706
Gammaproteobacteria
TGT
Thr
>WENV170199302
CEPL01098829
452332
Gammaproteobacteria
GTG
His
>WENV170199305
CEPL01099457
460378
Gammaproteobacteria
TAC
Val
>WENV170199450
CEPL01119111
780642
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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