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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200674
CEPO01005565
779604
Gammaproteobacteria
GCA
Cys
>WENV170200714
CEPO01011901
271464
Gammaproteobacteria
TGG
Pro
>WENV170200716
CEPO01011901
452415
Gammaproteobacteria
GTG
His
>WENV170200661
CEPO01003458
656944
Gammaproteobacteria
CCT
Arg
>WENV170200807
CEPO01040346
653834
Gammaproteobacteria
TCC
Gly
>WENV170200774
CEPO01022616
30353
Gammaproteobacteria
GGA
Ser
>WENV170200735
CEPO01014999
502832
Gammaproteobacteria
GAA
Phe
>WENV170200635
CEPO01000691
30865
Gammaproteobacteria
GCT
Ser
>WENV170200637
CEPO01000691
276971
Gammaproteobacteria
ACG
Arg
>WENV170200636
CEPO01000691
276971
Gammaproteobacteria
ACG
Arg
>WENV170200801
CEPO01039666
271254
Gammaproteobacteria
CAT
Met
>WENV170200704
CEPO01010487
464809
Gammaproteobacteria
GAA
Phe
>WENV170200715
CEPO01011901
275462
Gammaproteobacteria
TCT
Arg
>WENV170200733
CEPO01014831
276973
Gammaproteobacteria
GAC
Val
>WENV170200669
CEPO01004963
271600
Gammaproteobacteria
GAT
Ile
>WENV170200681
CEPO01006895
46215
Gammaproteobacteria
GCT
Ser
>WENV170200691
CEPO01008443
278982
Gammaproteobacteria
CCG
Arg
>WENV170200721
CEPO01013468
452412
Gammaproteobacteria
GCC
Gly
>WENV170200805
CEPO01040346
452404
Gammaproteobacteria
TGT
Thr
>WENV170200726
CEPO01014243
271200
Gammaproteobacteria
CAT
Met
>WENV170200646
CEPO01001692
113485
Gammaproteobacteria
CAA
Leu
>WENV170200804
CEPO01040287
112371
Gammaproteobacteria
CAA
Leu
>WENV170200808
CEPO01040346
452405
Gammaproteobacteria
GGT
Thr
>WENV170200827
CEPO01045619
454397
Gammaproteobacteria
TGT
Thr
>WENV170200806
CEPO01040346
218035
Gammaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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