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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170201444
CEPQ01020863
455930
Betaproteobacteria
CGT
Thr
>WENV170201430
CEPQ01019873
780573
Betaproteobacteria
TCC
Gly
>WENV170201643
CEPQ01041308
780573
Betaproteobacteria
TCC
Gly
>WENV170201753
CEPQ01049275
271893
Betaproteobacteria
GGG
Pro
>WENV170201262
CEPQ01005031
452922
Betaproteobacteria
TTC
Glu
>WENV170201263
CEPQ01005031
452922
Betaproteobacteria
TTC
Glu
>WENV170201265
CEPQ01005031
452922
Betaproteobacteria
TTC
Glu
>WENV170201217
CEPQ01002777
273217
Betaproteobacteria
ACG
Arg
>WENV170201775
CEPQ01050915
30459
Betaproteobacteria
GGA
Ser
>WENV170201715
CEPQ01047287
452923
Betaproteobacteria
TTT
Lys
>WENV170202012
CEPQ01101386
273219
Betaproteobacteria
TCT
Arg
>WENV170201198
CEPQ01001992
455936
Betaproteobacteria
CCA
Trp
>WENV170201742
CEPQ01048467
8301
Betaproteobacteria
GCT
Ser
>WENV170201579
CEPQ01034147
281168
Betaproteobacteria
TCT
Arg
>WENV170201722
CEPQ01047566
785937
Betaproteobacteria
CCC
Gly
>WENV170201186
CEPQ01001629
455929
Betaproteobacteria
GCC
Gly
>WENV170201185
CEPQ01001629
455929
Betaproteobacteria
GCC
Gly
>WENV170201871
CEPQ01054529
274398
Betaproteobacteria
CAT
Met
>WENV170201614
CEPQ01037912
46141
Betaproteobacteria
TGA
Ser
>WENV170201355
CEPQ01014886
477082
Betaproteobacteria
CTT
Lys
>WENV170201668
CEPQ01043751
274720
Betaproteobacteria
TTG
Gln
>WENV170202171
CEPQ01125996
180653
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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