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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170207281
CEPU01063284
457453
Gammaproteobacteria
TTT
Lys
>WENV170207282
CEPU01063284
457453
Gammaproteobacteria
TTT
Lys
>WENV170207310
CEPU01067056
271464
Gammaproteobacteria
TGG
Pro
>WENV170208262
CEPU01229957
656944
Gammaproteobacteria
CCT
Arg
>WENV170207953
CEPU01138718
276974
Gammaproteobacteria
GGG
Pro
>WENV170207942
CEPU01137762
502832
Gammaproteobacteria
GAA
Phe
>WENV170206792
CEPU01012266
276971
Gammaproteobacteria
ACG
Arg
>WENV170206791
CEPU01012266
276971
Gammaproteobacteria
ACG
Arg
>WENV170206903
CEPU01022831
274864
Gammaproteobacteria
ACG
Arg
>WENV170208084
CEPU01148978
464809
Gammaproteobacteria
GAA
Phe
>WENV170207947
CEPU01138031
276973
Gammaproteobacteria
GAC
Val
>WENV170208198
CEPU01196724
452404
Gammaproteobacteria
TGT
Thr
>WENV170208049
CEPU01147053
781121
Gammaproteobacteria
GCA
Cys
>WENV170206904
CEPU01022853
273754
Gammaproteobacteria
GTT
Asn
>WENV170208380
CEPU01274191
113485
Gammaproteobacteria
CAA
Leu
>WENV170207668
CEPU01111236
45712
Gammaproteobacteria
GGA
Ser
>WENV170207598
CEPU01101070
452881
Gammaproteobacteria
TGT
Thr
>WENV170206806
CEPU01013690
273121
Gammaproteobacteria
GAC
Val
>WENV170207993
CEPU01142147
276972
Gammaproteobacteria
CCA
Trp
>WENV170207954
CEPU01138750
276972
Gammaproteobacteria
CCA
Trp
>WENV170208403
CEPU01277892
271286
Gammaproteobacteria
CAT
Met
>WENV170207610
CEPU01102883
276970
Gammaproteobacteria
CCG
Arg
>WENV170207374
CEPU01074610
276970
Gammaproteobacteria
CCG
Arg
>WENV170208179
CEPU01182491
30792
Gammaproteobacteria
GGA
Ser
>WENV170207151
CEPU01047886
274093
Gammaproteobacteria
GTC
Asp
>WENV170206790
CEPU01012266
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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