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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170213116
CEPX01011704
455289
Alphaproteobacteria
TTT
Lys
>WENV170213955
CEPX01060127
274224
Alphaproteobacteria
CAT
Met
>WENV170217470
CEPX01394558
655363
Alphaproteobacteria
GGT
Thr
>WENV170214591
CEPX01095260
274144
Alphaproteobacteria
GTG
His
>WENV170215812
CEPX01178103
274144
Alphaproteobacteria
GTG
His
>WENV170215044
CEPX01126073
455172
Alphaproteobacteria
GGC
Ala
>WENV170213052
CEPX01007668
276089
Alphaproteobacteria
CCG
Arg
>WENV170214502
CEPX01090010
274138
Alphaproteobacteria
CAT
Met
>WENV170215454
CEPX01156945
454512
Alphaproteobacteria
CCA
Trp
>WENV170216121
CEPX01192322
274141
Alphaproteobacteria
CCT
Arg
>WENV170216862
CEPX01286069
112839
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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