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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170218975
CEPZ01032617
275457
Gammaproteobacteria
ACG
Arg
>WENV170219809
CEPZ01083238
456247
Gammaproteobacteria
CCA
Trp
>WENV170220153
CEPZ01095593
278155
Gammaproteobacteria
TGG
Pro
>WENV170219802
CEPZ01082595
273749
Gammaproteobacteria
CCA
Trp
>WENV170219904
CEPZ01085707
273749
Gammaproteobacteria
CCA
Trp
>WENV170219275
CEPZ01053546
780642
Gammaproteobacteria
GCA
Cys
>WENV170218423
CEPZ01006127
452332
Gammaproteobacteria
GTG
His
>WENV170218451
CEPZ01007577
479074
Gammaproteobacteria
GCC
Gly
>WENV170218395
CEPZ01004963
277041
Gammaproteobacteria
CCA
Trp
>WENV170219510
CEPZ01068671
274148
Gammaproteobacteria
GTC
Asp
>WENV170218629
CEPZ01015485
271613
Gammaproteobacteria
GTC
Asp
>WENV170219441
CEPZ01064343
459319
Gammaproteobacteria
GAA
Phe
>WENV170220572
CEPZ01182928
270905
Gammaproteobacteria
CCG
Arg
>WENV170218607
CEPZ01014886
270666
Gammaproteobacteria
CCA
Trp
>WENV170220281
CEPZ01133344
466510
Gammaproteobacteria
GCC
Gly
>WENV170218680
CEPZ01017489
456267
Gammaproteobacteria
GAA
Phe
>WENV170218446
CEPZ01007450
30792
Gammaproteobacteria
GGA
Ser
>WENV170220467
CEPZ01170100
454091
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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