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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170221972
CEQC01037593
655421
Alphaproteobacteria
GGT
Thr
>WENV170221971
CEQC01037593
452629
Alphaproteobacteria
GAA
Phe
>WENV170221828
CEQC01015168
780331
Alphaproteobacteria
TCC
Gly
>WENV170221769
CEQC01006969
180423
Alphaproteobacteria
CAA
Leu
>WENV170221830
CEQC01015416
656001
Alphaproteobacteria
GCC
Gly
>WENV170221837
CEQC01016243
271268
Alphaproteobacteria
CAT
Met
>WENV170221756
CEQC01006201
281026
Alphaproteobacteria
CAT
Met
>WENV170221755
CEQC01006200
281026
Alphaproteobacteria
CAT
Met
>WENV170221932
CEQC01031241
47093
Alphaproteobacteria
CGA
Ser
>WENV170221792
CEQC01009914
153953
Alphaproteobacteria
TAA
Leu
>WENV170222020
CEQC01071042
282775
Alphaproteobacteria
TCT
Arg
>WENV170221770
CEQC01007129
19999
Alphaproteobacteria
GCT
Ser
>WENV170221735
CEQC01004601
655363
Alphaproteobacteria
GGT
Thr
>WENV170221772
CEQC01007633
274144
Alphaproteobacteria
GTG
His
>WENV170221710
CEQC01003258
274144
Alphaproteobacteria
GTG
His
>WENV170221933
CEQC01031889
180320
Alphaproteobacteria
TAG
Leu
>WENV170221823
CEQC01013875
455172
Alphaproteobacteria
GGC
Ala
>WENV170221757
CEQC01006325
276089
Alphaproteobacteria
CCG
Arg
>WENV170221803
CEQC01011047
273450
Alphaproteobacteria
TCT
Arg
>WENV170221825
CEQC01014764
779636
Alphaproteobacteria
CTG
Gln
>WENV170221957
CEQC01036001
451850
Alphaproteobacteria
TAC
Val
>WENV170221774
CEQC01007848
454512
Alphaproteobacteria
CCA
Trp
>WENV170221822
CEQC01013808
455360
Alphaproteobacteria
CGC
Ala
>WENV170221906
CEQC01027448
655361
Alphaproteobacteria
GCC
Gly
>WENV170221758
CEQC01006579
274141
Alphaproteobacteria
CCT
Arg
>WENV170221934
CEQC01032185
294262
Alphaproteobacteria
CCT
Arg
>WENV170221939
CEQC01033789
780346
Alphaproteobacteria
CTG
Gln
>WENV170221848
CEQC01018095
780346
Alphaproteobacteria
CTG
Gln
>WENV170221800
CEQC01010993
663828
Alphaproteobacteria
TTC
Glu
>WENV170221801
CEQC01010993
663828
Alphaproteobacteria
TTC
Glu
>WENV170221745
CEQC01005293
461047
Alphaproteobacteria
CCA
Trp
>WENV170221901
CEQC01027224
112429
Alphaproteobacteria
GAG
Leu
>WENV170221762
CEQC01006817
281027
Alphaproteobacteria
CCT
Arg
>WENV170221841
CEQC01017168
31090
Alphaproteobacteria
GGA
Ser
>WENV170221891
CEQC01025961
281029
Alphaproteobacteria
GGG
Pro
>WENV170221899
CEQC01027021
454433
Alphaproteobacteria
TGT
Thr
>WENV170221925
CEQC01029945
295679
Alphaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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