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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170228934
CEQG01054528
451922
Gammaproteobacteria
TGT
Thr
>WENV170228369
CEQG01005717
275457
Gammaproteobacteria
ACG
Arg
>WENV170228436
CEQG01011563
779604
Gammaproteobacteria
GCA
Cys
>WENV170229712
CEQG01151759
457453
Gammaproteobacteria
TTT
Lys
>WENV170229215
CEQG01089562
271464
Gammaproteobacteria
TGG
Pro
>WENV170229071
CEQG01071917
474520
Gammaproteobacteria
CCA
Trp
>WENV170229237
CEQG01092808
270982
Gammaproteobacteria
GAT
Ile
>WENV170228392
CEQG01006878
653834
Gammaproteobacteria
TCC
Gly
>WENV170228489
CEQG01015086
272023
Gammaproteobacteria
GAT
Ile
>WENV170228778
CEQG01040122
273870
Gammaproteobacteria
ACG
Arg
>WENV170228779
CEQG01040122
273870
Gammaproteobacteria
ACG
Arg
>WENV170228942
CEQG01054992
456706
Gammaproteobacteria
TGT
Thr
>WENV170229686
CEQG01148229
276974
Gammaproteobacteria
GGG
Pro
>WENV170228334
CEQG01002542
276974
Gammaproteobacteria
GGG
Pro
>WENV170229957
CEQG01251168
456247
Gammaproteobacteria
CCA
Trp
>WENV170229177
CEQG01083473
454967
Gammaproteobacteria
TTT
Lys
>WENV170228422
CEQG01010020
458351
Gammaproteobacteria
TTG
Gln
>WENV170229057
CEQG01070823
297860
Gammaproteobacteria
GAC
Val
>WENV170229141
CEQG01078589
451784
Gammaproteobacteria
GAA
Phe
>WENV170228643
CEQG01028387
782287
Gammaproteobacteria
GCA
Cys
>WENV170228777
CEQG01040122
12379
Gammaproteobacteria
GCT
Ser
>WENV170228490
CEQG01015086
474720
Gammaproteobacteria
TGC
Ala
>WENV170229174
CEQG01082957
271458
Gammaproteobacteria
GGG
Pro
>WENV170228594
CEQG01023416
452416
Gammaproteobacteria
TTT
Lys
>WENV170229061
CEQG01071052
273847
Gammaproteobacteria
CCT
Arg
>WENV170229168
CEQG01081766
273122
Gammaproteobacteria
CAT
Met
>WENV170229392
CEQG01114654
276185
Gammaproteobacteria
TGG
Pro
>WENV170229058
CEQG01070823
274775
Gammaproteobacteria
GAC
Val
>WENV170228547
CEQG01019091
276973
Gammaproteobacteria
GAC
Val
>WENV170228541
CEQG01018772
276973
Gammaproteobacteria
GAC
Val
>WENV170228478
CEQG01014284
179997
Gammaproteobacteria
GTA
Tyr
>WENV170228410
CEQG01008669
114536
Gammaproteobacteria
CAA
Leu
>WENV170229210
CEQG01088605
655197
Gammaproteobacteria
TTG
Gln
>WENV170229169
CEQG01081805
46215
Gammaproteobacteria
GCT
Ser
>WENV170229631
CEQG01141245
278982
Gammaproteobacteria
CCG
Arg
>WENV170229583
CEQG01135678
452412
Gammaproteobacteria
GCC
Gly
>WENV170228435
CEQG01011563
452412
Gammaproteobacteria
GCC
Gly
>WENV170228645
CEQG01028387
479074
Gammaproteobacteria
GCC
Gly
>WENV170229024
CEQG01064997
47267
Gammaproteobacteria
GGA
Ser
>WENV170229190
CEQG01084704
781121
Gammaproteobacteria
GCA
Cys
>WENV170228576
CEQG01022614
113485
Gammaproteobacteria
CAA
Leu
>WENV170229660
CEQG01146016
452881
Gammaproteobacteria
TGT
Thr
>WENV170229582
CEQG01135556
271613
Gammaproteobacteria
GTC
Asp
>WENV170229426
CEQG01117424
276972
Gammaproteobacteria
CCA
Trp
>WENV170229878
CEQG01222079
275006
Gammaproteobacteria
GGG
Pro
>WENV170228463
CEQG01013210
453897
Gammaproteobacteria
TAC
Val
>WENV170228393
CEQG01006878
452405
Gammaproteobacteria
GGT
Thr
>WENV170229514
CEQG01126922
456234
Gammaproteobacteria
GAA
Phe
>WENV170228644
CEQG01028387
112817
Gammaproteobacteria
TAA
Leu
>WENV170228765
CEQG01038744
112814
Gammaproteobacteria
GAG
Leu
>WENV170228723
CEQG01034690
276970
Gammaproteobacteria
CCG
Arg
>WENV170229450
CEQG01121069
459406
Gammaproteobacteria
TAC
Val
>WENV170228878
CEQG01049004
455293
Gammaproteobacteria
TTT
Lys
>WENV170228766
CEQG01038744
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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