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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170230092
CEQH01002613
455289
Alphaproteobacteria
TTT
Lys
>WENV170230428
CEQH01034732
452629
Alphaproteobacteria
GAA
Phe
>WENV170230091
CEQH01002593
30553
Alphaproteobacteria
GGA
Ser
>WENV170230475
CEQH01039636
780331
Alphaproteobacteria
TCC
Gly
>WENV170230617
CEQH01054514
780331
Alphaproteobacteria
TCC
Gly
>WENV170230410
CEQH01033257
454510
Alphaproteobacteria
CGT
Thr
>WENV170231138
CEQH01126467
654960
Alphaproteobacteria
CTC
Glu
>WENV170231625
CEQH01244700
47093
Alphaproteobacteria
CGA
Ser
>WENV170230592
CEQH01051595
274224
Alphaproteobacteria
CAT
Met
>WENV170230334
CEQH01024640
274224
Alphaproteobacteria
CAT
Met
>WENV170231666
CEQH01259873
153953
Alphaproteobacteria
TAA
Leu
>WENV170230674
CEQH01062466
451742
Alphaproteobacteria
GGC
Ala
>WENV170231312
CEQH01146789
655363
Alphaproteobacteria
GGT
Thr
>WENV170231280
CEQH01142016
274144
Alphaproteobacteria
GTG
His
>WENV170230904
CEQH01093958
455172
Alphaproteobacteria
GGC
Ala
>WENV170230682
CEQH01063163
276089
Alphaproteobacteria
CCG
Arg
>WENV170230646
CEQH01058347
779636
Alphaproteobacteria
CTG
Gln
>WENV170230314
CEQH01023058
274138
Alphaproteobacteria
CAT
Met
>WENV170230859
CEQH01087918
463649
Alphaproteobacteria
GAA
Phe
>WENV170231016
CEQH01110293
451850
Alphaproteobacteria
TAC
Val
>WENV170230572
CEQH01049860
45928
Alphaproteobacteria
TGA
Ser
>WENV170230912
CEQH01095991
653931
Alphaproteobacteria
GTT
Asn
>WENV170230426
CEQH01034453
455360
Alphaproteobacteria
CGC
Ala
>WENV170230285
CEQH01019962
655361
Alphaproteobacteria
GCC
Gly
>WENV170230442
CEQH01036393
655361
Alphaproteobacteria
GCC
Gly
>WENV170230939
CEQH01099027
294262
Alphaproteobacteria
CCT
Arg
>WENV170230979
CEQH01104744
294262
Alphaproteobacteria
CCT
Arg
>WENV170231206
CEQH01134313
452755
Alphaproteobacteria
TAC
Val
>WENV170231707
CEQH01267721
112429
Alphaproteobacteria
GAG
Leu
>WENV170231297
CEQH01144213
113889
Alphaproteobacteria
CAG
Leu
>WENV170230960
CEQH01102229
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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