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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170231935
CEQI01006908
275457
Gammaproteobacteria
ACG
Arg
>WENV170231906
CEQI01006172
779604
Gammaproteobacteria
GCA
Cys
>WENV170232342
CEQI01052077
452415
Gammaproteobacteria
GTG
His
>WENV170232306
CEQI01047740
30353
Gammaproteobacteria
GGA
Ser
>WENV170232047
CEQI01018231
276974
Gammaproteobacteria
GGG
Pro
>WENV170232315
CEQI01048840
271458
Gammaproteobacteria
GGG
Pro
>WENV170232055
CEQI01019251
271254
Gammaproteobacteria
CAT
Met
>WENV170232125
CEQI01025413
464809
Gammaproteobacteria
GAA
Phe
>WENV170232730
CEQI01095206
276185
Gammaproteobacteria
TGG
Pro
>WENV170231908
CEQI01006351
276973
Gammaproteobacteria
GAC
Val
>WENV170231868
CEQI01002560
276973
Gammaproteobacteria
GAC
Val
>WENV170232176
CEQI01033065
452332
Gammaproteobacteria
GTG
His
>WENV170232400
CEQI01057188
271287
Gammaproteobacteria
CAT
Met
>WENV170232326
CEQI01050311
46215
Gammaproteobacteria
GCT
Ser
>WENV170232190
CEQI01034291
452412
Gammaproteobacteria
GCC
Gly
>WENV170232106
CEQI01023985
452412
Gammaproteobacteria
GCC
Gly
>WENV170231905
CEQI01006172
452412
Gammaproteobacteria
GCC
Gly
>WENV170232765
CEQI01098185
271460
Gammaproteobacteria
CGG
Pro
>WENV170232235
CEQI01038438
452404
Gammaproteobacteria
TGT
Thr
>WENV170232267
CEQI01042278
452377
Gammaproteobacteria
GTT
Asn
>WENV170232512
CEQI01068383
452377
Gammaproteobacteria
GTT
Asn
>WENV170232362
CEQI01053653
113485
Gammaproteobacteria
CAA
Leu
>WENV170232136
CEQI01027602
271613
Gammaproteobacteria
GTC
Asp
>WENV170232142
CEQI01028244
112371
Gammaproteobacteria
CAA
Leu
>WENV170232396
CEQI01056788
452414
Gammaproteobacteria
TTC
Glu
>WENV170232569
CEQI01075200
276970
Gammaproteobacteria
CCG
Arg
>WENV170232568
CEQI01075134
276970
Gammaproteobacteria
CCG
Arg
>WENV170232093
CEQI01023217
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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