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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170243383
CEQO01146900
46190
Alphaproteobacteria
GGA
Ser
>WENV170243698
CEQO01185889
30553
Alphaproteobacteria
GGA
Ser
>WENV170241840
CEQO01013221
274224
Alphaproteobacteria
CAT
Met
>WENV170241733
CEQO01004897
452894
Alphaproteobacteria
CCA
Trp
>WENV170242806
CEQO01086623
653532
Alphaproteobacteria
GTT
Asn
>WENV170243796
CEQO01220553
655363
Alphaproteobacteria
GGT
Thr
>WENV170243322
CEQO01142075
274144
Alphaproteobacteria
GTG
His
>WENV170241770
CEQO01007996
455172
Alphaproteobacteria
GGC
Ala
>WENV170242152
CEQO01034012
455360
Alphaproteobacteria
CGC
Ala
>WENV170242245
CEQO01042658
655361
Alphaproteobacteria
GCC
Gly
>WENV170243004
CEQO01106689
656140
Alphaproteobacteria
GAC
Val
>WENV170242217
CEQO01039079
656140
Alphaproteobacteria
GAC
Val
>WENV170242322
CEQO01047557
112839
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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