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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170247016
CEQQ01010170
275457
Gammaproteobacteria
ACG
Arg
>WENV170247496
CEQQ01042437
467367
Gammaproteobacteria
GGT
Thr
>WENV170247621
CEQQ01052143
276974
Gammaproteobacteria
GGG
Pro
>WENV170247985
CEQQ01084879
276974
Gammaproteobacteria
GGG
Pro
>WENV170246869
CEQQ01002258
276973
Gammaproteobacteria
GAC
Val
>WENV170247944
CEQQ01080871
276973
Gammaproteobacteria
GAC
Val
>WENV170248104
CEQQ01095204
276973
Gammaproteobacteria
GAC
Val
>WENV170248847
CEQQ01226015
780642
Gammaproteobacteria
GCA
Cys
>WENV170246918
CEQQ01004675
452332
Gammaproteobacteria
GTG
His
>WENV170247950
CEQQ01081326
271287
Gammaproteobacteria
CAT
Met
>WENV170248416
CEQQ01128283
278982
Gammaproteobacteria
CCG
Arg
>WENV170248033
CEQQ01089082
452412
Gammaproteobacteria
GCC
Gly
>WENV170248557
CEQQ01140402
113485
Gammaproteobacteria
CAA
Leu
>WENV170247043
CEQQ01012606
271613
Gammaproteobacteria
GTC
Asp
>WENV170247522
CEQQ01044065
276970
Gammaproteobacteria
CCG
Arg
>WENV170247978
CEQQ01084039
459406
Gammaproteobacteria
TAC
Val
>WENV170248730
CEQQ01185064
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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