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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170248919
CEQR01000829
672057
Gammaproteobacteria
TTG
Gln
>WENV170248921
CEQR01000858
454967
Gammaproteobacteria
TTT
Lys
>WENV170248922
CEQR01001103
112813
Gammaproteobacteria
CAG
Leu
>WENV170248924
CEQR01001722
454969
Gammaproteobacteria
GTT
Asn
>WENV170248926
CEQR01001782
454424
Gammaproteobacteria
GAA
Phe
>WENV170248927
CEQR01001782
655197
Gammaproteobacteria
TTG
Gln
>WENV170248928
CEQR01002077
112814
Gammaproteobacteria
GAG
Leu
>WENV170248929
CEQR01002077
271253
Gammaproteobacteria
CAT
Met
>WENV170248933
CEQR01002641
273859
Gammaproteobacteria
CGG
Pro
>WENV170248935
CEQR01002707
87214
Gammaproteobacteria
GGA
Ser
>WENV170248937
CEQR01004098
273845
Gammaproteobacteria
GGG
Pro
>WENV170248938
CEQR01004425
12379
Gammaproteobacteria
GCT
Ser
>WENV170248941
CEQR01004767
114536
Gammaproteobacteria
CAA
Leu
>WENV170248944
CEQR01006210
273847
Gammaproteobacteria
CCT
Arg
>WENV170248945
CEQR01006301
655197
Gammaproteobacteria
TTG
Gln
>WENV170248951
CEQR01006553
275288
Gammaproteobacteria
GTC
Asp
>WENV170249216
CEQR01110492
30520
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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