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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170251165
CEQT01064900
275457
Gammaproteobacteria
ACG
Arg
>WENV170251166
CEQT01064900
275457
Gammaproteobacteria
ACG
Arg
>WENV170250884
CEQT01031637
456706
Gammaproteobacteria
TGT
Thr
>WENV170250909
CEQT01034457
459789
Gammaproteobacteria
GTT
Asn
>WENV170250910
CEQT01034457
459789
Gammaproteobacteria
GTT
Asn
>WENV170250911
CEQT01034457
459789
Gammaproteobacteria
GTT
Asn
>WENV170250698
CEQT01010753
780642
Gammaproteobacteria
GCA
Cys
>WENV170251168
CEQT01064939
452332
Gammaproteobacteria
GTG
His
>WENV170252113
CEQT01232525
271287
Gammaproteobacteria
CAT
Met
>WENV170251585
CEQT01116220
278982
Gammaproteobacteria
CCG
Arg
>WENV170251144
CEQT01063273
452412
Gammaproteobacteria
GCC
Gly
>WENV170252211
CEQT01265672
273754
Gammaproteobacteria
GTT
Asn
>WENV170250622
CEQT01003171
452377
Gammaproteobacteria
GTT
Asn
>WENV170250759
CEQT01016940
271613
Gammaproteobacteria
GTC
Asp
>WENV170250848
CEQT01026686
112884
Gammaproteobacteria
CAG
Leu
>WENV170250851
CEQT01026686
112884
Gammaproteobacteria
CAG
Leu
>WENV170250657
CEQT01006740
276372
Gammaproteobacteria
ACG
Arg
>WENV170251176
CEQT01065760
271253
Gammaproteobacteria
CAT
Met
>WENV170251421
CEQT01096571
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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