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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170254843
CEQW01026701
457453
Gammaproteobacteria
TTT
Lys
>WENV170254968
CEQW01041347
278942
Gammaproteobacteria
CCG
Arg
>WENV170255499
CEQW01129990
276974
Gammaproteobacteria
GGG
Pro
>WENV170255031
CEQW01046708
456247
Gammaproteobacteria
CCA
Trp
>WENV170254538
CEQW01005810
30865
Gammaproteobacteria
GCT
Ser
>WENV170254540
CEQW01005810
276971
Gammaproteobacteria
ACG
Arg
>WENV170254539
CEQW01005810
276971
Gammaproteobacteria
ACG
Arg
>WENV170254955
CEQW01039836
278155
Gammaproteobacteria
TGG
Pro
>WENV170254486
CEQW01002311
273122
Gammaproteobacteria
CAT
Met
>WENV170254487
CEQW01002311
273122
Gammaproteobacteria
CAT
Met
>WENV170255464
CEQW01124176
271287
Gammaproteobacteria
CAT
Met
>WENV170254882
CEQW01031445
278982
Gammaproteobacteria
CCG
Arg
>WENV170254958
CEQW01039836
274148
Gammaproteobacteria
GTC
Asp
>WENV170254555
CEQW01006585
113485
Gammaproteobacteria
CAA
Leu
>WENV170255235
CEQW01063247
452881
Gammaproteobacteria
TGT
Thr
>WENV170254796
CEQW01022989
276972
Gammaproteobacteria
CCA
Trp
>WENV170255260
CEQW01064444
459319
Gammaproteobacteria
GAA
Phe
>WENV170255062
CEQW01048760
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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