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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170255956
CEQX01037438
454866
Gammaproteobacteria
TAC
Val
>WENV170256338
CEQX01076408
454866
Gammaproteobacteria
TAC
Val
>WENV170256997
CEQX01148615
273854
Gammaproteobacteria
CAT
Met
>WENV170257051
CEQX01152315
457453
Gammaproteobacteria
TTT
Lys
>WENV170255953
CEQX01037213
46027
Gammaproteobacteria
GGA
Ser
>WENV170257012
CEQX01149444
656944
Gammaproteobacteria
CCT
Arg
>WENV170255633
CEQX01011389
270982
Gammaproteobacteria
GAT
Ile
>WENV170255811
CEQX01025952
112813
Gammaproteobacteria
CAG
Leu
>WENV170255781
CEQX01021878
273752
Gammaproteobacteria
CAT
Met
>WENV170256440
CEQX01088308
276974
Gammaproteobacteria
GGG
Pro
>WENV170256447
CEQX01089583
454967
Gammaproteobacteria
TTT
Lys
>WENV170255994
CEQX01040677
454857
Gammaproteobacteria
GTG
His
>WENV170255558
CEQX01005086
655146
Gammaproteobacteria
CCG
Arg
>WENV170257602
CEQX01353541
273847
Gammaproteobacteria
CCT
Arg
>WENV170256673
CEQX01116620
274776
Gammaproteobacteria
GGG
Pro
>WENV170255510
CEQX01000565
273749
Gammaproteobacteria
CCA
Trp
>WENV170256637
CEQX01112765
464809
Gammaproteobacteria
GAA
Phe
>WENV170255948
CEQX01037038
276973
Gammaproteobacteria
GAC
Val
>WENV170255871
CEQX01030464
452332
Gammaproteobacteria
GTG
His
>WENV170256505
CEQX01095933
114536
Gammaproteobacteria
CAA
Leu
>WENV170257108
CEQX01155678
278982
Gammaproteobacteria
CCG
Arg
>WENV170255997
CEQX01040809
278982
Gammaproteobacteria
CCG
Arg
>WENV170256635
CEQX01112543
452412
Gammaproteobacteria
GCC
Gly
>WENV170255537
CEQX01003343
452412
Gammaproteobacteria
GCC
Gly
>WENV170256475
CEQX01093048
218101
Gammaproteobacteria
GTA
Tyr
>WENV170255931
CEQX01035747
273753
Gammaproteobacteria
ACG
Arg
>WENV170255565
CEQX01005427
180482
Gammaproteobacteria
GAG
Leu
>WENV170255743
CEQX01018504
273859
Gammaproteobacteria
CGG
Pro
>WENV170255955
CEQX01037438
454864
Gammaproteobacteria
TAC
Val
>WENV170256273
CEQX01067415
113485
Gammaproteobacteria
CAA
Leu
>WENV170256245
CEQX01064377
454969
Gammaproteobacteria
GTT
Asn
>WENV170255623
CEQX01010970
273852
Gammaproteobacteria
GTC
Asp
>WENV170255566
CEQX01005434
453897
Gammaproteobacteria
TAC
Val
>WENV170256688
CEQX01117953
112814
Gammaproteobacteria
GAG
Leu
>WENV170256689
CEQX01117953
271253
Gammaproteobacteria
CAT
Met
>WENV170256886
CEQX01140657
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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