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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260886
CERB01019650
656944
Gammaproteobacteria
CCT
Arg
>WENV170260766
CERB01007923
270982
Gammaproteobacteria
GAT
Ile
>WENV170261394
CERB01069405
270982
Gammaproteobacteria
GAT
Ile
>WENV170260772
CERB01008842
467367
Gammaproteobacteria
GGT
Thr
>WENV170261397
CERB01069562
276974
Gammaproteobacteria
GGG
Pro
>WENV170261446
CERB01074533
276974
Gammaproteobacteria
GGG
Pro
>WENV170260813
CERB01012991
276971
Gammaproteobacteria
ACG
Arg
>WENV170260978
CERB01029824
457171
Gammaproteobacteria
GTT
Asn
>WENV170261702
CERB01102025
276973
Gammaproteobacteria
GAC
Val
>WENV170261568
CERB01089078
276973
Gammaproteobacteria
GAC
Val
>WENV170262460
CERB01180236
278982
Gammaproteobacteria
CCG
Arg
>WENV170261172
CERB01044862
459731
Gammaproteobacteria
GGT
Thr
>WENV170261739
CERB01106272
113485
Gammaproteobacteria
CAA
Leu
>WENV170261515
CERB01083247
457459
Gammaproteobacteria
GGC
Ala
>WENV170262801
CERB01340820
276970
Gammaproteobacteria
CCG
Arg
>WENV170261724
CERB01104552
459406
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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