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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170265609
CERD01230368
457159
Alphaproteobacteria
CGC
Ala
>WENV170265116
CERD01109679
273448
Alphaproteobacteria
CGG
Pro
>WENV170264596
CERD01048658
452884
Alphaproteobacteria
CCA
Trp
>WENV170264509
CERD01039691
455289
Alphaproteobacteria
TTT
Lys
>WENV170265233
CERD01121790
788550
Alphaproteobacteria
TCC
Gly
>WENV170265403
CERD01158261
274127
Alphaproteobacteria
GTG
His
>WENV170264469
CERD01035491
780331
Alphaproteobacteria
TCC
Gly
>WENV170264420
CERD01032662
780331
Alphaproteobacteria
TCC
Gly
>WENV170264242
CERD01016812
654960
Alphaproteobacteria
CTC
Glu
>WENV170265125
CERD01110483
655270
Alphaproteobacteria
GAA
Phe
>WENV170264932
CERD01087776
653538
Alphaproteobacteria
TTC
Glu
>WENV170265055
CERD01104997
271268
Alphaproteobacteria
CAT
Met
>WENV170264987
CERD01096822
153953
Alphaproteobacteria
TAA
Leu
>WENV170264576
CERD01047357
282775
Alphaproteobacteria
TCT
Arg
>WENV170264405
CERD01031516
451742
Alphaproteobacteria
GGC
Ala
>WENV170264981
CERD01095645
451742
Alphaproteobacteria
GGC
Ala
>WENV170264550
CERD01044503
19999
Alphaproteobacteria
GCT
Ser
>WENV170264473
CERD01035922
457162
Alphaproteobacteria
TTT
Lys
>WENV170264085
CERD01003753
655363
Alphaproteobacteria
GGT
Thr
>WENV170264760
CERD01067038
274144
Alphaproteobacteria
GTG
His
>WENV170265592
CERD01226739
180320
Alphaproteobacteria
TAG
Leu
>WENV170264089
CERD01004564
455172
Alphaproteobacteria
GGC
Ala
>WENV170265157
CERD01115067
455172
Alphaproteobacteria
GGC
Ala
>WENV170264978
CERD01095111
273450
Alphaproteobacteria
TCT
Arg
>WENV170265136
CERD01112389
274131
Alphaproteobacteria
CAT
Met
>WENV170264579
CERD01047541
655392
Alphaproteobacteria
GAC
Val
>WENV170264321
CERD01025791
655358
Alphaproteobacteria
TTG
Gln
>WENV170264591
CERD01048167
653931
Alphaproteobacteria
GTT
Asn
>WENV170264590
CERD01048166
653931
Alphaproteobacteria
GTT
Asn
>WENV170264471
CERD01035811
454512
Alphaproteobacteria
CCA
Trp
>WENV170264467
CERD01035427
454512
Alphaproteobacteria
CCA
Trp
>WENV170264910
CERD01083772
455360
Alphaproteobacteria
CGC
Ala
>WENV170265089
CERD01107361
270796
Alphaproteobacteria
GTC
Asp
>WENV170265010
CERD01099297
656140
Alphaproteobacteria
GAC
Val
>WENV170265196
CERD01118723
112429
Alphaproteobacteria
GAG
Leu
>WENV170264464
CERD01035298
112839
Alphaproteobacteria
CAG
Leu
>WENV170265458
CERD01186248
275927
Alphaproteobacteria
CCG
Arg
>WENV170265488
CERD01197622
784639
Alphaproteobacteria
TCC
Gly
>WENV170264228
CERD01016194
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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