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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170264163
CERD01010656
273758
Gammaproteobacteria
GAC
Val
>WENV170264112
CERD01005692
779604
Gammaproteobacteria
GCA
Cys
>WENV170264187
CERD01012458
779604
Gammaproteobacteria
GCA
Cys
>WENV170265319
CERD01127567
457453
Gammaproteobacteria
TTT
Lys
>WENV170264323
CERD01025890
656944
Gammaproteobacteria
CCT
Arg
>WENV170264966
CERD01093345
656944
Gammaproteobacteria
CCT
Arg
>WENV170264377
CERD01029169
453181
Gammaproteobacteria
GTG
His
>WENV170265523
CERD01208232
474520
Gammaproteobacteria
CCA
Trp
>WENV170264918
CERD01084856
270982
Gammaproteobacteria
GAT
Ile
>WENV170264307
CERD01023537
112813
Gammaproteobacteria
CAG
Leu
>WENV170264719
CERD01062282
456706
Gammaproteobacteria
TGT
Thr
>WENV170265312
CERD01127297
456706
Gammaproteobacteria
TGT
Thr
>WENV170265098
CERD01108519
276974
Gammaproteobacteria
GGG
Pro
>WENV170264602
CERD01049036
276974
Gammaproteobacteria
GGG
Pro
>WENV170264142
CERD01007676
276974
Gammaproteobacteria
GGG
Pro
>WENV170264511
CERD01040050
454967
Gammaproteobacteria
TTT
Lys
>WENV170264888
CERD01081215
291486
Gammaproteobacteria
CCG
Arg
>WENV170264694
CERD01060634
297860
Gammaproteobacteria
GAC
Val
>WENV170264096
CERD01005109
275002
Gammaproteobacteria
ACG
Arg
>WENV170264097
CERD01005109
275002
Gammaproteobacteria
ACG
Arg
>WENV170264098
CERD01005109
275002
Gammaproteobacteria
ACG
Arg
>WENV170264230
CERD01016351
451982
Gammaproteobacteria
GGC
Ala
>WENV170264113
CERD01005699
271458
Gammaproteobacteria
GGG
Pro
>WENV170264264
CERD01018821
452416
Gammaproteobacteria
TTT
Lys
>WENV170264265
CERD01018821
452416
Gammaproteobacteria
TTT
Lys
>WENV170265591
CERD01226068
273847
Gammaproteobacteria
CCT
Arg
>WENV170264288
CERD01021529
273857
Gammaproteobacteria
TGG
Pro
>WENV170264207
CERD01014173
273749
Gammaproteobacteria
CCA
Trp
>WENV170264816
CERD01072893
464809
Gammaproteobacteria
GAA
Phe
>WENV170264342
CERD01026105
276185
Gammaproteobacteria
TGG
Pro
>WENV170264695
CERD01060634
274775
Gammaproteobacteria
GAC
Val
>WENV170265250
CERD01123434
276973
Gammaproteobacteria
GAC
Val
>WENV170264945
CERD01089875
272970
Gammaproteobacteria
CCG
Arg
>WENV170265294
CERD01126487
655197
Gammaproteobacteria
TTG
Gln
>WENV170264256
CERD01018180
278982
Gammaproteobacteria
CCG
Arg
>WENV170264111
CERD01005692
452412
Gammaproteobacteria
GCC
Gly
>WENV170264851
CERD01077132
218101
Gammaproteobacteria
GTA
Tyr
>WENV170264114
CERD01006056
30516
Gammaproteobacteria
TGA
Ser
>WENV170264164
CERD01010738
30516
Gammaproteobacteria
TGA
Ser
>WENV170264894
CERD01082029
30516
Gammaproteobacteria
TGA
Ser
>WENV170264647
CERD01053739
271460
Gammaproteobacteria
CGG
Pro
>WENV170264289
CERD01021529
273858
Gammaproteobacteria
TCT
Arg
>WENV170264488
CERD01037482
275518
Gammaproteobacteria
ACG
Arg
>WENV170264489
CERD01037482
275518
Gammaproteobacteria
ACG
Arg
>WENV170264162
CERD01010623
47267
Gammaproteobacteria
GGA
Ser
>WENV170264300
CERD01023015
780557
Gammaproteobacteria
GCA
Cys
>WENV170264278
CERD01020080
113485
Gammaproteobacteria
CAA
Leu
>WENV170264153
CERD01008945
281567
Gammaproteobacteria
CAT
Met
>WENV170264392
CERD01030509
454969
Gammaproteobacteria
GTT
Asn
>WENV170264092
CERD01004680
114727
Gammaproteobacteria
TAA
Leu
>WENV170264634
CERD01052356
271613
Gammaproteobacteria
GTC
Asp
>WENV170264940
CERD01088536
273845
Gammaproteobacteria
GGG
Pro
>WENV170265004
CERD01098219
276972
Gammaproteobacteria
CCA
Trp
>WENV170264753
CERD01066277
275006
Gammaproteobacteria
GGG
Pro
>WENV170264087
CERD01004425
453897
Gammaproteobacteria
TAC
Val
>WENV170264301
CERD01023015
112817
Gammaproteobacteria
TAA
Leu
>WENV170264564
CERD01045401
112814
Gammaproteobacteria
GAG
Leu
>WENV170264487
CERD01037482
31220
Gammaproteobacteria
GCT
Ser
>WENV170264988
CERD01096854
655194
Gammaproteobacteria
GGT
Thr
>WENV170264135
CERD01007209
456267
Gammaproteobacteria
GAA
Phe
>WENV170265323
CERD01127628
47265
Gammaproteobacteria
TGA
Ser
>WENV170265249
CERD01123434
30792
Gammaproteobacteria
GGA
Ser
>WENV170264260
CERD01018653
655145
Gammaproteobacteria
CCT
Arg
>WENV170264565
CERD01045401
271253
Gammaproteobacteria
CAT
Met
>WENV170265271
CERD01125072
112363
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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