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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170265995
CERE01029303
275828
Alphaproteobacteria
GTC
Asp
>WENV170266398
CERE01065345
180489
Alphaproteobacteria
TAG
Leu
>WENV170265629
CERE01000286
452917
Alphaproteobacteria
TAC
Val
>WENV170266762
CERE01106906
780326
Alphaproteobacteria
CCC
Gly
>WENV170266210
CERE01050434
46070
Alphaproteobacteria
CGA
Ser
>WENV170266674
CERE01099589
653534
Alphaproteobacteria
GCC
Gly
>WENV170266352
CERE01060071
45799
Alphaproteobacteria
GCT
Ser
>WENV170266262
CERE01055073
218187
Alphaproteobacteria
GTA
Tyr
>WENV170266440
CERE01070797
112803
Alphaproteobacteria
CAG
Leu
>WENV170266780
CERE01107120
46190
Alphaproteobacteria
GGA
Ser
>WENV170266619
CERE01094310
46237
Alphaproteobacteria
TGA
Ser
>WENV170266134
CERE01042820
270887
Alphaproteobacteria
TGG
Pro
>WENV170266476
CERE01075375
291540
Alphaproteobacteria
TGG
Pro
>WENV170266172
CERE01046050
218119
Alphaproteobacteria
>WENV170266073
CERE01037184
653538
Alphaproteobacteria
TTC
Glu
>WENV170266148
CERE01044017
780661
Alphaproteobacteria
GCA
Cys
>WENV170267059
CERE01184630
655359
Alphaproteobacteria
GAC
Val
>WENV170266019
CERE01031357
154065
Alphaproteobacteria
GAG
Leu
>WENV170266180
CERE01047138
456891
Alphaproteobacteria
CGT
Thr
>WENV170266351
CERE01060018
653532
Alphaproteobacteria
GTT
Asn
>WENV170266593
CERE01090155
655394
Alphaproteobacteria
GTT
Asn
>WENV170266111
CERE01040972
274131
Alphaproteobacteria
CAT
Met
>WENV170266630
CERE01095229
655358
Alphaproteobacteria
TTG
Gln
>WENV170266616
CERE01093141
113204
Alphaproteobacteria
GAG
Leu
>WENV170266198
CERE01048903
46072
Alphaproteobacteria
GCT
Ser
>WENV170265930
CERE01024401
270799
Alphaproteobacteria
CAT
Met
>WENV170265682
CERE01006089
46222
Alphaproteobacteria
GGA
Ser
>WENV170266379
CERE01063078
270796
Alphaproteobacteria
GTC
Asp
>WENV170265994
CERE01029303
270796
Alphaproteobacteria
GTC
Asp
>WENV170265949
CERE01026154
655361
Alphaproteobacteria
GCC
Gly
>WENV170266022
CERE01031984
154064
Alphaproteobacteria
CAG
Leu
>WENV170266441
CERE01070888
274133
Alphaproteobacteria
ACG
Arg
>WENV170266983
CERE01167177
655822
Alphaproteobacteria
GAC
Val
>WENV170266897
CERE01138346
281027
Alphaproteobacteria
CCT
Arg
>WENV170266628
CERE01095138
654103
Alphaproteobacteria
GAA
Phe
>WENV170266661
CERE01098505
274130
Alphaproteobacteria
CGG
Pro
>WENV170266688
CERE01100516
653539
Alphaproteobacteria
GAC
Val
>WENV170266188
CERE01047683
784639
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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